RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 NOS2P35228 1153 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 MATKP42679 507 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 CLCN4P51793 760 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 KPNA1P52294 538 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 YWHAGP61981 247 aaKnown RBP eCLIP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 PTP4A2Q12974 167 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 MTA1Q13330 715 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 CCDC142Q17RM4 750 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 ARHGAP15Q53QZ3 475 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 C2CD6Q53TS8 623 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 DCAF6Q58WW2 860 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 BSPRYQ5W0U4 402 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 LILRA6Q6PI73 481 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 OLFML1Q6UWY5 402 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 SPATA31D4Q6ZUB0 917 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 NYAP1Q6ZVC0 841 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 BEND5Q7L4P6 421 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 RBM23Q86U06 439 aaKnown RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 ZMIZ2Q8NF64 920 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 TPCN2Q8NHX9 752 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 FNIP1Q8TF40 1166 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 GDPD5Q8WTR4 605 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 ARHGEF26Q96DR7 871 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 GAS2L1Q99501 681 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 CNPY3Q9BT09 278 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 NSUN3Q9H649 340 aaKnown RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 ZDHHC7Q9NXF8 308 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 SLC12A6Q9UHW9 1150 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 ZMYM5Q9UJ78 669 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
COL12A1-206ENST00000474564 JRKLQ9Y4A0 524 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 USP3Q9Y6I4 520 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 PTPRSQ13332 1948 aa10.84□□□□□ -0.67
COL12A1-206ENST00000474564 DNAH12Q6ZR08 3092 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 RCCD1A6NED2 376 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 HHLA1C9JL84 531 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 ZNF197O14709 1029 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 DAB1O75553 588 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 ZMYND10O75800 440 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 SEC24AO95486 1093 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 KRT7P08729 469 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 CDC25CP30307 473 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 RFC1P35251 1148 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-206ENST00000474564 IRS1P35568 1242 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 NRIP1P48552 1158 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 ZNF143P52747 638 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-206ENST00000474564 CACNA2D1P54289 1103 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 TAF10Q12962 218 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 CLUL1Q15846 466 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 DUSP6Q16828 381 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 ARL13BQ3SXY8 428 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 C11orf63Q6NUN7 778 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 DNAJB7Q7Z6W7 309 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-206ENST00000474564 DNAAF5Q86Y56 855 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 SLC35F6Q8N357 371 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 MNS1Q8NEH6 495 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 RXFP2Q8WXD0 754 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 MRPS31Q92665 395 aaKnown RBP10.83□□□□□ -0.68
COL12A1-206ENST00000474564 RNF34Q969K3 372 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 PSMG2Q969U7 264 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 TRMT2BQ96GJ1 504 aaKnown RBP10.83□□□□□ -0.68
COL12A1-206ENST00000474564 NAPGQ99747 312 aaPredicted RBP10.83□□□□□ -0.68
COL12A1-206ENST00000474564 PRO3102Q9H379 93 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 IGFLR1Q9H665 355 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 MAN1C1Q9NR34 630 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 ASAH2Q9NR71 780 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 CLIC5Q9NZA1 410 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 USTQ9Y2C2 406 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 DUSP10Q9Y6W6 482 aa10.83□□□□□ -0.68
COL12A1-206ENST00000474564 CCDC66A2RUB6 948 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TNFRSF10BO14763 440 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 PER2O15055 1255 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 PRPSAP2O60256 369 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 PALMO75781 387 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 GRAP2O75791 330 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 SOAT2O75908 522 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 PROSCO94903 275 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 ARHGEF15O94989 841 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 SLC2A3P11169 496 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 MAN1A1P33908 653 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 ATP5C1P36542 298 aaKnown RBP10.82□□□□□ -0.68
COL12A1-206ENST00000474564 PTPN9P43378 593 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 SULT1E1P49888 294 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TUBB2AQ13885 445 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 RPS6KA1Q15418 735 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 SLC25A52Q3SY17 297 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 SDHAF4Q5VUM1 108 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 RHOT1Q8IXI2 618 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 DEFB106AQ8N104 65 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TTC9BQ8N6N2 239 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 SCAMP5Q8TAC9 235 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 OLIG1Q8TAK6 271 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 GPR152Q8TDT2 470 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 MYRFLQ96LU7 910 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 DDX23Q9BUQ8 820 aaKnown RBP10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TUBB2BQ9BVA1 445 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 TTLL2Q9BWV7 592 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 FAM204AQ9H8W3 233 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 SFXN1Q9H9B4 322 aa10.82□□□□□ -0.68
COL12A1-206ENST00000474564 OSGEPQ9NPF4 335 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms