RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 AMOTQ4VCS5 1084 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 OLFML2BQ68BL8 750 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 CAVIN1Q6NZI2 390 aaKnown RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 ATG4DQ86TL0 474 aaPredicted RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 WDR63Q8IWG1 891 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 PEX5LQ8IYB4 626 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 SPATA20Q8TB22 786 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 BAHD1Q8TBE0 780 aaPredicted RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 SUN5Q8TC36 379 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 CSGALNACT1Q8TDX6 532 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 CASP10Q92851 521 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 KAT5Q92993 513 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 TUBGCP3Q96CW5 907 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 EID2BQ96D98 161 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 GIMAP5Q96F15 307 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 MISP3Q96FF7 219 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 PRAM1Q96QH2 718 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 PRPF18Q99633 342 aaKnown RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 TXN2Q99757 166 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 APOL6Q9BWW8 343 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 AP5M1Q9H0R1 490 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 SERHLQ9NQF3 203 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 GPR27Q9NS67 375 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 RRP7BPQ9NSQ0 103 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 SUCLA2Q9P2R7 463 aaPredicted RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 DNAJB9Q9UBS3 223 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 AURKCQ9UQB9 309 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 TNS1Q9HBL0 1735 aaKnown RBP6.36□□□□□ -1.39
RTF1-203ENST00000473214 CROCC2H7BZ55 1655 aa6.36□□□□□ -1.39
RTF1-203ENST00000473214 ADGRL3Q9HAR2 1447 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 METP08581 1390 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 SLC12A8A0AV02 714 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 HNRNPCL2B2RXH8 293 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 H3BUI4 141 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 FCHO1O14526 889 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 DVL2O14641 736 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 SLC27A2O14975 620 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 PGRMC2O15173 223 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 SHOXO15266 292 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 HNRNPCL1O60812 293 aaKnown RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 METTL18O95568 372 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 STAMBPO95630 424 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 NDST3O95803 873 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 FTCDO95954 541 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 TK1P04183 234 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CLEC3BP05452 202 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 GNAT2P19087 354 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 IL10P22301 178 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 TGM1P22735 817 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 TBXAS1P24557 533 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 CIITAP33076 1130 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 NT5C2P49902 561 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 HERVK_113P62684 666 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 ERVK-24P63145 666 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 MRPS9P82933 396 aaKnown RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 HTRA4P83105 476 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 AMPD2Q01433 879 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 NSUN2Q08J23 767 aaKnown RBP eCLIP6.35□□□□□ -1.39
RTF1-203ENST00000473214 SCRN1Q12765 414 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 RALGDSQ12967 914 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 BNIP3Q12983 259 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 NMIQ13287 307 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 CAMK2DQ13557 499 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 PKN1Q16512 942 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CRY1Q16526 586 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 DPY19L1Q2PZI1 675 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CYP27C1Q4G0S4 372 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 ARHGAP15Q53QZ3 475 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 C3orf38Q5JPI3 329 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 NBPF12Q5TAG4 269 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 UTP14CQ5TAP6 766 aaKnown RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 THEMIS2Q5TEJ8 643 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 FAXCQ5TGI0 409 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CCDC62Q6P9F0 684 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 DRICH1Q6PGQ1 229 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 IKBIPQ70UQ0 350 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 C16orf59Q7L2K0 433 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 GLRX5Q86SX6 157 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CXorf67Q86X51 503 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 SPATA2LQ8IUW3 424 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 ZFPM1Q8IX07 1006 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 SCML4Q8N228 414 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 GMCL1P1Q8NEA9 526 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 OR6C4Q8NGE1 309 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CYP2W1Q8TAV3 490 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 NRG4Q8WWG1 115 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.35□□□□□ -1.39
RTF1-203ENST00000473214 FATE1Q969F0 183 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 KTI12Q96EK9 354 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 PGAP3Q96FM1 320 aaPredicted RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 SLC35A4Q96G79 324 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 CORO1BQ9BR76 489 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 WDR18Q9BV38 432 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 UTP14AQ9BVJ6 771 aaKnown RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 EIF2AQ9BY44 585 aaKnown RBP6.35□□□□□ -1.39
RTF1-203ENST00000473214 CLSTN2Q9H4D0 955 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 IPPKQ9H8X2 491 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 BRF2Q9HAW0 419 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 PDE11AQ9HCR9 933 aa6.35□□□□□ -1.39
RTF1-203ENST00000473214 SLC35C2Q9NQQ7 365 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms