RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 LUZP1Q86V48 1076 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 MFSD6LQ8IWD5 586 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 OR6B3Q8NGW1 331 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 TTC8Q8TAM2 541 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 SPATA18Q8TC71 538 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 FAM200AQ8TCP9 573 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 PKMYT1Q99640 499 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 CRACR2AQ9BSW2 395 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 BCO2Q9BYV7 579 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 OSBPL6Q9BZF3 934 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 VPS16Q9H269 839 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 NDST4Q9H3R1 872 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 TSPY26PQ9H489 355 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 SLITRK6Q9H5Y7 841 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 DDX43Q9NXZ2 648 aaKnown RBP9.71□□□□□ -0.86
SMC4-213ENST00000472282 GCNT4Q9P109 453 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 HSFX1Q9UBD0 423 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 NME7Q9Y5B8 376 aa9.71□□□□□ -0.86
SMC4-213ENST00000472282 RALGAPA1Q6GYQ0 2036 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 F5P12259 2224 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 GTPBP10A4D1E9 387 aaKnown RBP9.7□□□□□ -0.86
SMC4-213ENST00000472282 SLC38A8A6NNN8 435 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ZNF263O14978 683 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ATP2C2O75185 946 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 CAVIN2O95810 425 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ATP1A3P13637 1013 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 CD58P19256 250 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 CDK11BP21127 795 aaKnown RBP9.7□□□□□ -0.86
SMC4-213ENST00000472282 LMO2P25791 158 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 PCSK1P29120 753 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 HOXC13P31276 330 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 COPB1P53618 953 aaKnown RBP9.7□□□□□ -0.86
SMC4-213ENST00000472282 PSMC1P62191 440 aaKnown RBP9.7□□□□□ -0.86
SMC4-213ENST00000472282 FCHO2Q0JRZ9 810 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 MTAPQ13126 283 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 GAS6Q14393 721 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 INTS6LQ5JSJ4 861 aaKnown RBP9.7□□□□□ -0.86
SMC4-213ENST00000472282 TRIM65Q6PJ69 517 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ZNF852Q6ZMS4 543 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 GBP6Q6ZN66 633 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ARHGEF19Q8IW93 802 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ANKRD20A12PQ8NF67 263 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 LMO3Q8TAP4 145 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 RIN3Q8TB24 985 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 SPPL2BQ8TCT7 592 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 DEPDC1BQ8WUY9 529 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 FAM3CQ92520 227 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 CNTNAP3BQ96NU0 1288 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 NT5C1BQ96P26 610 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ARID3AQ99856 593 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 SYT15Q9BQS2 421 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ACBD6Q9BR61 282 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 SLC46A2Q9BY10 475 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 CNTNAP3Q9BZ76 1288 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 GPR88Q9GZN0 384 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 INTS2Q9H0H0 1204 aaKnown RBP9.7□□□□□ -0.86
SMC4-213ENST00000472282 SNX25Q9H3E2 840 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 DPEP3Q9H4B8 488 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 TRPV5Q9NQA5 729 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 GTSE1Q9NYZ3 720 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 HMGXB4Q9UGU5 601 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 GTF3C4Q9UKN8 822 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 ASB3Q9Y575 518 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 PCDHB5Q9Y5E4 795 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 PIAS3Q9Y6X2 628 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 MYOFQ9NZM1 2061 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 FAM186AA6NE01 2351 aa9.7□□□□□ -0.86
SMC4-213ENST00000472282 MYBPHLA2RUH7 354 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 A8MXQ7 604 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 LAMTOR5O43504 91 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 TADA3O75528 432 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 F11P03951 625 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 TPM2P07951 284 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 SLC9A1P19634 815 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 CYP2F1P24903 491 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 GNL1P36915 607 aaPredicted RBP9.69□□□□□ -0.86
SMC4-213ENST00000472282 TUFMP49411 452 aaKnown RBP9.69□□□□□ -0.86
SMC4-213ENST00000472282 ZNF445P59923 1031 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 CSTF1Q05048 431 aaKnown RBP9.69□□□□□ -0.86
SMC4-213ENST00000472282 TNK2Q07912 1038 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 ORC1Q13415 861 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 CUL2Q13617 745 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 DDR2Q16832 855 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 EXOC3L4Q17RC7 722 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 TXNDC11Q6PKC3 985 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 ITIH5Q86UX2 942 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 DCP1BQ8IZD4 617 aaKnown RBP9.69□□□□□ -0.86
SMC4-213ENST00000472282 PPM1KQ8N3J5 372 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 DCLK2Q8N568 766 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 SUMF1Q8NBK3 374 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 C2orf15Q8WU43 125 aaKnown RBP9.69□□□□□ -0.86
SMC4-213ENST00000472282 KAT5Q92993 513 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 NELL2Q99435 816 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 TASP1Q9H6P5 420 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 CYP3A43Q9HB55 503 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 CRTAC1Q9NQ79 661 aa9.69□□□□□ -0.86
SMC4-213ENST00000472282 RBM12Q9NTZ6 932 aaKnown RBP9.69□□□□□ -0.86
SMC4-213ENST00000472282 LIMA1Q9UHB6 759 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms