RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 C11orf16Q9NQ32 467 aa18.64■□□□□ 0.57
VPS72-204ENST00000471423 ST7Q9NRC1 585 aa18.64■□□□□ 0.57
VPS72-204ENST00000471423 SMPD4Q9NXE4 827 aa18.64■□□□□ 0.57
VPS72-204ENST00000471423 CYTH4Q9UIA0 394 aa18.64■□□□□ 0.57
VPS72-204ENST00000471423 CA14Q9ULX7 337 aa18.64■□□□□ 0.57
VPS72-204ENST00000471423 PCDHGC3Q9UN70 934 aa18.64■□□□□ 0.57
VPS72-204ENST00000471423 CPQQ9Y646 472 aa18.64■□□□□ 0.57
VPS72-204ENST00000471423 KIF26AQ9ULI4 1882 aaPredicted RBP18.64■□□□□ 0.57
VPS72-204ENST00000471423 A0A1W2PQC6 194 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 TMEM221A6NGB7 291 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 M0R296 226 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 ZNF263O14978 683 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 GABBR2O75899 941 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 CYP11B1P15538 503 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 KRT9P35527 623 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 SOX5P35711 763 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 UBASH3AP57075 661 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 SLC7A9P82251 487 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 ZXDBP98169 803 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 NR1I3Q14994 352 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 PM20D1Q6GTS8 502 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 BHLHA9Q7RTU4 235 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 NDRG1Q92597 394 aaKnown RBP18.63■□□□□ 0.57
VPS72-204ENST00000471423 ZFYVE19Q96K21 471 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 HSFY1Q96LI6 401 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 NACA2Q9H009 215 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 CYLDQ9NQC7 956 aa18.63■□□□□ 0.57
VPS72-204ENST00000471423 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.63■□□□□ 0.57
VPS72-204ENST00000471423 CHADO15335 359 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 TBX18O95935 607 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 RARGP13631 454 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 STAT1P42224 750 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 PSEN1P49768 467 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 DAOAP59103 153 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 YWHAGP61981 247 aaKnown RBP eCLIP18.62■□□□□ 0.57
VPS72-204ENST00000471423 PFKPQ01813 784 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 PDCLQ13371 301 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 IER5LQ5T953 404 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 TAF3Q5VWG9 929 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 CACNA2D4Q7Z3S7 1137 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 NOP9Q86U38 636 aaKnown RBP18.62■□□□□ 0.57
VPS72-204ENST00000471423 SIX5Q8N196 739 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 ARHGAP18Q8N392 663 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 EPS8L1Q8TE68 723 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 CLEC4CQ8WTT0 213 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 IRF7Q92985 503 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 C1QTNF1Q9BXJ1 281 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 CNGB3Q9NQW8 809 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 THG1LQ9NWX6 298 aaKnown RBP18.62■□□□□ 0.57
VPS72-204ENST00000471423 CLIC5Q9NZA1 410 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 WNT16Q9UBV4 365 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 NUDT5Q9UKK9 219 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 COL4A2P08572 1712 aa18.62■□□□□ 0.57
VPS72-204ENST00000471423 TICRRQ7Z2Z1 1910 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 COL4A3Q01955 1670 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 LEFTY2O00292 366 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 ARNTLO00327 626 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 MDM4O15151 490 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 PDGFBP01127 241 aaPredicted RBP18.61■□□□□ 0.57
VPS72-204ENST00000471423 MTF1Q14872 753 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 ARHGAP29Q52LW3 1261 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 SCML4Q8N228 414 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 C1orf131Q8NDD1 294 aaKnown RBP18.61■□□□□ 0.57
VPS72-204ENST00000471423 STK32AQ8WU08 396 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 DDX1Q92499 740 aaKnown RBP18.61■□□□□ 0.57
VPS72-204ENST00000471423 DNASE1L2Q92874 299 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 ZFRQ96KR1 1074 aaKnown RBP18.61■□□□□ 0.57
VPS72-204ENST00000471423 SLC4A5Q9BY07 1137 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 MIS12Q9H081 205 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 LHX5Q9H2C1 402 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 PDCL3Q9H2J4 239 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 ARHGEF3Q9NR81 526 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 IFNKQ9P0W0 207 aa18.61■□□□□ 0.57
VPS72-204ENST00000471423 KRBA1A5PL33 1030 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 YJEFN3A6XGL0 299 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 E5RJQ4 531 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 E7ENQ6 273 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 RALAP11233 206 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 TCF3P15923 654 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 ATP5C1P36542 298 aaKnown RBP18.6■□□□□ 0.57
VPS72-204ENST00000471423 ACADSBP45954 432 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 RPL34P49207 117 aaKnown RBP18.6■□□□□ 0.57
VPS72-204ENST00000471423 PLCB2Q00722 1185 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 TMEM31Q5JXX7 168 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 C10orf120Q5SQS8 335 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 CC2D1AQ6P1N0 951 aaPredicted RBP18.6■□□□□ 0.57
VPS72-204ENST00000471423 WDTC1Q8N5D0 677 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 SLC20A1Q8WUM9 679 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 HEBP1Q9NRV9 189 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 CFAP97Q9P2B7 532 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 TJP2Q9UDY2 1190 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 NOCTQ9UK39 431 aaKnown RBP18.6■□□□□ 0.57
VPS72-204ENST00000471423 CEP83Q9Y592 693 aa18.6■□□□□ 0.57
VPS72-204ENST00000471423 SCAMP3O14828 347 aaKnown RBP18.59■□□□□ 0.57
VPS72-204ENST00000471423 GPR37L1O60883 481 aa18.59■□□□□ 0.57
VPS72-204ENST00000471423 FBXO21O94952 628 aa18.59■□□□□ 0.57
VPS72-204ENST00000471423 MMEP08473 750 aa18.59■□□□□ 0.57
VPS72-204ENST00000471423 IRF1P10914 325 aa18.59■□□□□ 0.57
VPS72-204ENST00000471423 PBX1P40424 430 aa18.59■□□□□ 0.57
VPS72-204ENST00000471423 ARID5AQ03989 594 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms