RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 NUDT16L1Q9BRJ7 211 aaKnown RBP7.46□□□□□ -1.22
SMC5-202ENST00000471372 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 RMI1Q9H9A7 625 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 CNOT6Q9ULM6 557 aaKnown RBP7.46□□□□□ -1.22
SMC5-202ENST00000471372 SH3BP1Q9Y3L3 701 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 LEFTY2O00292 366 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 KLK10O43240 276 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 DOK2O60496 412 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 CBFA2T3O75081 653 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 CPA1P15085 419 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 KCNA2P16389 499 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 GLDCP23378 1020 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 RPS6KB1P23443 525 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 RBL1P28749 1068 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 POLD2P49005 469 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 GATMP50440 423 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 CCR9P51686 369 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 DRG2P55039 364 aaKnown RBP7.45□□□□□ -1.22
SMC5-202ENST00000471372 ADAM17P78536 824 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 CCNIQ14094 377 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 E2F2Q14209 437 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 ZNF484Q5JVG2 852 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 TTLL5Q6EMB2 1281 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 CLEC9AQ6UXN8 241 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 SYNE3Q6ZMZ3 975 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 GALNT5Q7Z7M9 940 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 RHOT2Q8IXI1 618 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 GALNT4Q8N4A0 578 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 USP38Q8NB14 1042 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 TP53I13Q8NBR0 393 aaPredicted RBP7.45□□□□□ -1.22
SMC5-202ENST00000471372 SUN3Q8TAQ9 357 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 ADAMTS15Q8TE58 950 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 DACT3Q96B18 629 aaPredicted RBP7.45□□□□□ -1.22
SMC5-202ENST00000471372 ZSWIM1Q9BR11 485 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 REXO4Q9GZR2 422 aaKnown RBP7.45□□□□□ -1.22
SMC5-202ENST00000471372 KRT84Q9NSB2 600 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 SSX2IPQ9Y2D8 614 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 SLC27A6Q9Y2P4 619 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 SNX14Q9Y5W7 946 aa7.45□□□□□ -1.22
SMC5-202ENST00000471372 PI4KAP2A4QPH2 592 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 MFAP3LO75121 409 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 TIPRLO75663 272 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 IPO13O94829 963 aaKnown RBP7.44□□□□□ -1.22
SMC5-202ENST00000471372 FGFR4P22455 802 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 PPIFP30405 207 aaKnown RBP7.44□□□□□ -1.22
SMC5-202ENST00000471372 PRKAR1BP31321 381 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 NAP1L1P55209 391 aaKnown RBP7.44□□□□□ -1.22
SMC5-202ENST00000471372 HSD11B2P80365 405 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 POU5F1Q01860 360 aaKnown RBP7.44□□□□□ -1.22
SMC5-202ENST00000471372 NHLH2Q02577 135 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 VMACQ2NL98 169 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 P3H1Q32P28 736 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 PIK3AP1Q6ZUJ8 805 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 R3HCC1LQ7Z5L2 792 aaKnown RBP7.44□□□□□ -1.22
SMC5-202ENST00000471372 FSTL5Q8N475 847 aaPredicted RBP7.44□□□□□ -1.22
SMC5-202ENST00000471372 C11orf44Q8N8P7 122 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 Q8NA96 180 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 OR56A1Q8NGH5 318 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 KTI12Q96EK9 354 aaPredicted RBP7.44□□□□□ -1.22
SMC5-202ENST00000471372 OR14A2Q96R54 314 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 LMF1Q96S06 567 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 HAPLN3Q96S86 360 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 ANKEF1Q9NU02 776 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 SERTAD3Q9UJW9 196 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 RIMKLBQ9ULI2 386 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 SORCS3Q9UPU3 1222 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 COL15A1P39059 1388 aa7.44□□□□□ -1.22
SMC5-202ENST00000471372 SLC38A8A6NNN8 435 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 AHCYL1O43865 530 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 TSPAN3O60637 253 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 INHBBP09529 407 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 MCM2P49736 904 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 NDUFV1P49821 464 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 CDK7P50613 346 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 CLNS1AP54105 237 aaKnown RBP7.43□□□□□ -1.22
SMC5-202ENST00000471372 TIAL1Q01085 375 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMC5-202ENST00000471372 GPR68Q15743 365 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 CCNG2Q16589 344 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 LRRC24Q50LG9 513 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 TMEM196Q5HYL7 178 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 METTL24Q5JXM2 366 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 WDR45BQ5MNZ6 344 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 RBM20Q5T481 1227 aaKnown RBP7.43□□□□□ -1.22
SMC5-202ENST00000471372 DEPDC1Q5TB30 811 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 B4GALNT4Q76KP1 1039 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 RASGRP2Q7LDG7 609 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 ZMIZ2Q8NF64 920 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 LINS1Q8NG48 757 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 KCNG4Q8TDN1 519 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 SLC22A17Q8WUG5 538 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 CCDC134Q9H6E4 229 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 PLEKHA2Q9HB19 425 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 IL21RQ9HBE5 538 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 MSL2Q9HCI7 577 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 USP15Q9Y4E8 981 aaPredicted RBP7.43□□□□□ -1.22
SMC5-202ENST00000471372 PCDHB7Q9Y5E2 793 aa7.43□□□□□ -1.22
SMC5-202ENST00000471372 A0A1B0GTW7 788 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 E7ENX8 843 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 M0QYT0 321 aa7.42□□□□□ -1.22
SMC5-202ENST00000471372 TMEM63AO94886 807 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms