RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 SLC7A5P2Q9GIP4 190 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 ZNF696Q9H7X3 374 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 C10orf88Q9H8K7 445 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 ZNF395Q9H8N7 513 aaPredicted RBP4.39□□□□□ -1.71
VPS50-210ENST00000471188 ZFYVE28Q9HCC9 887 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 HOMER2Q9NSB8 354 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 IGSF9Q9P2J2 1179 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 RAB26Q9ULW5 256 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 CDC14AQ9UNH5 594 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 PLA2G4CQ9UP65 541 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 POMPQ9Y244 141 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 FRMPD4Q14CM0 1322 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 LMO7Q8WWI1 1683 aa4.39□□□□□ -1.71
VPS50-210ENST00000471188 MAGEB6P1A0A0J9YX57 407 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 ARHGEF37A1IGU5 675 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 KRBA1A5PL33 1030 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 USP17L12C9JPN9 530 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 USP17L21D6R901 530 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 E5RJQ4 531 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 KPNA4O00629 521 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 CFLARO15519 480 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 SORBS3O60504 671 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 AKAP3O75969 853 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 FBXO21O94952 628 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 CCNYL3P0C7X3 344 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 PIM1P11309 404 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 ZNF23P17027 643 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 DDX5P17844 614 aaKnown RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 SSTR1P30872 391 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 BTDP43251 543 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 CCT8P50990 548 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 MMP16P51512 607 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 PEX3P56589 373 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 TRAF2Q12933 501 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 PTK6Q13882 451 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 CYP1B1Q16678 543 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 TMEM132AQ24JP5 1023 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 FAM182AQ5T1J6 154 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 GPR107Q5VW38 600 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 BORAQ6PGQ7 559 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 KYAT3Q6YP21 454 aaKnown RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 TAS2R42Q7RTR8 314 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 KRT25Q7Z3Z0 450 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 EXOC8Q8IYI6 725 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 ALDH16A1Q8IZ83 802 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 RTKN2Q8IZC4 609 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 SYNE4Q8N205 404 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 RAPGEF4Q8WZA2 1011 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 HSPH1Q92598 858 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 SENP7Q9BQF6 1050 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 SLC39A3Q9BRY0 314 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 MXD3Q9BW11 206 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 MRPL46Q9H2W6 279 aaKnown RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 MARCH7Q9H992 704 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 SLC52A2Q9HAB3 445 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 GINM1Q9NU53 330 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 RGS17Q9UGC6 210 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 BCAP29Q9UHQ4 241 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 CDH22Q9UJ99 828 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 KIAA1024Q9UPX6 916 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 AKAP12Q02952 1782 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 TM9SF1O15321 606 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 MYO1DO94832 1006 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 ZSCAN5DPP0CG00 497 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 CHRNB1P11230 501 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 EIF2AK2P19525 551 aaKnown RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 PRKACBP22694 351 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 IVDP26440 423 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 MAP4P27816 1152 aaKnown RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 GCAP28676 217 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 IL6STP40189 918 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 HSD17B4P51659 736 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 RHBDL3P58872 404 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 EIF3EP60228 445 aaKnown RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 KRT76Q01546 638 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 GPS1Q13098 491 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 PRKG1Q13976 671 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 TFDP1Q14186 410 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 EPHA7Q15375 998 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 PPP6R3Q5H9R7 873 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 LDLRAP1Q5SW96 308 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 C11orf63Q6NUN7 778 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 RFPL4BQ6ZWI9 263 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 FRMD5Q7Z6J6 570 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 SETD3Q86TU7 594 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 BPHLQ86WA6 291 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 PALM2Q8IXS6 379 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 LZTR1Q8N653 840 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 RNF148Q8N7C7 305 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 NACC2Q96BF6 587 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 ISOC1Q96CN7 298 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 RMND5BQ96G75 393 aaPredicted RBP4.38□□□□□ -1.71
VPS50-210ENST00000471188 PAFAH2Q99487 392 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 COQ7Q99807 217 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 AGPAT1Q99943 283 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 TMEM79Q9BSE2 394 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 APOL6Q9BWW8 343 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 SLC13A1Q9BZW2 595 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 KLC2Q9H0B6 622 aa4.38□□□□□ -1.71
VPS50-210ENST00000471188 GREM2Q9H772 168 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms