RNA–Protein interactions for RNA: ENST00000470531.5

CHD3-208, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 3,744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-208ENST00000470531 ATXN3LQ9H3M9 355 aa11.12□□□□□ -0.63
CHD3-208ENST00000470531 ASNSD1Q9NWL6 643 aa11.12□□□□□ -0.63
CHD3-208ENST00000470531 PEX11AO75192 247 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ATP5HO75947 161 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 VHLP40337 213 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 MAPK10P53779 464 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ATXN1P54253 815 aaKnown RBP11.11□□□□□ -0.63
CHD3-208ENST00000470531 PKNOX1P55347 436 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CENPCQ03188 943 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 BST1Q10588 318 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ITGA9Q13797 1035 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ACAP1Q15027 740 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 RAB6CQ53S08 254 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 FAM47CQ5HY64 1035 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 RAB6CQ9H0N0 254 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 RNPEPQ9H4A4 650 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 NMRK1Q9NWW6 199 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 PTPRJQ12913 1337 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CNTRLQ7Z7A1 2325 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CENPFP49454 3210 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 COQ9O75208 318 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 GPC4O75487 556 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ZWINTO95229 277 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 AMPD1P23109 780 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 AP2B1P63010 937 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 GTF2BQ00403 316 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CXCL9Q07325 125 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CCDC92Q53HC0 331 aaPredicted RBP11.11□□□□□ -0.63
CHD3-208ENST00000470531 DCAF6Q58WW2 860 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 LPCAT4Q643R3 524 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 GET4Q7L5D6 327 aaPredicted RBP11.11□□□□□ -0.63
CHD3-208ENST00000470531 ZCCHC9Q8N567 271 aaKnown RBP11.11□□□□□ -0.63
CHD3-208ENST00000470531 TFAP2BQ92481 460 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 PTPRN2Q92932 1015 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 GCNAQ96QF7 691 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ANGPTL2Q9UKU9 493 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ROBO3Q96MS0 1386 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 YDJCA8MPS7 323 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 NDC80O14777 642 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 MED7O43513 233 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 TSPAN3O60637 253 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 LDHAP00338 332 aaKnown RBP11.11□□□□□ -0.63
CHD3-208ENST00000470531 SNRPAP09012 282 aaKnown RBP11.11□□□□□ -0.63
CHD3-208ENST00000470531 DRG2P55039 364 aaKnown RBP11.11□□□□□ -0.63
CHD3-208ENST00000470531 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 C16orf87Q6PH81 154 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ASRGL1Q7L266 308 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ENOSF1Q7L5Y1 443 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CLNKQ7Z7G1 428 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 MAP4K3Q8IVH8 894 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 FAM81AQ8TBF8 368 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 DCLRE1BQ9H816 532 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 ACAD9Q9H845 621 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CYP4F12Q9HCS2 524 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 DMAC2Q9NW81 257 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 CYP39A1Q9NYL5 469 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 KCND2Q9NZV8 630 aa11.11□□□□□ -0.63
CHD3-208ENST00000470531 A0A0B4J269 797 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 PRR5-ARHGAP8B1AHC4 643 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 E5RJQ4 531 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 FGFR3P22607 806 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 GRIA1P42261 906 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 ARHGAP8P85298 464 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 PIGHQ14442 188 aaPredicted RBP11.1□□□□□ -0.63
CHD3-208ENST00000470531 PPP1R15BQ5SWA1 713 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 OLFML1Q6UWY5 402 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 LRRC74BQ6ZQY2 392 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 DEFB132Q7Z7B7 95 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 SCUBE1Q8IWY4 988 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 FBXO16Q8IX29 292 aaPredicted RBP11.1□□□□□ -0.63
CHD3-208ENST00000470531 C4orf19Q8IY42 314 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 DEFB107AQ8IZN7 70 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 OLIG1Q8TAK6 271 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 LMO3Q8TAP4 145 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 FAM172AQ8WUF8 416 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 LRGUKQ96M69 825 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 MAGEB5Q9BZ81 275 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 TLK1Q9UKI8 766 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 APOL1O14791 398 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 P4HA2O15460 535 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 EDF1O60869 148 aaKnown RBP11.1□□□□□ -0.63
CHD3-208ENST00000470531 TPBGLP0DKB5 382 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 P4HA1P13674 534 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 DPEP1P16444 411 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 NUDT2P50583 147 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 PLK1P53350 603 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 IL1RL1Q01638 556 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 OLIG2Q13516 323 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 KCTD2Q14681 263 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 EEF1DP3Q658K8 133 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 PHC3Q8NDX5 983 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 WDR60Q8WVS4 1066 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 ERLEC1Q96DZ1 483 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 YIPF2Q9BWQ6 316 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 PIF1Q9H611 641 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
CHD3-208ENST00000470531 TIMM13Q9Y5L4 95 aaPredicted RBP11.1□□□□□ -0.63
CHD3-208ENST00000470531 TCRBV9S1A1TA0A576 114 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms