RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 PITX1P78337 314 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 TRADDQ15628 312 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 CYP1B1Q16678 543 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 ZNF771Q7L3S4 317 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 SLC13A5Q86YT5 568 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 SLITRK1Q96PX8 696 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 CRISPLD1Q9H336 500 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 SYNCQ9H7C4 482 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 USP3Q9Y6I4 520 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 HOXA2O43364 376 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 ENDOD1O94919 500 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 TRUB2O95900 331 aaKnown RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 AMHP03971 560 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 ALDH2P05091 517 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 GLI1P08151 1106 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 MYBL2P10244 700 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 GPD1P21695 349 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 MIPP30301 263 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 ATXN1P54253 815 aaKnown RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 VSNL1P62760 191 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 MRPS5P82675 430 aaKnown RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 PM20D1Q6GTS8 502 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 FUT10Q6P4F1 479 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 POLNQ7Z5Q5 900 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 ADAT2Q7Z6V5 191 aaKnown RBP8.65□□□□□ -1.02
BRCA1-208ENST00000468300 ABI1Q8IZP0 508 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 LRRC43Q8N309 656 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 TTC9BQ8N6N2 239 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 SMARCD1Q96GM5 515 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 SLC2A13Q96QE2 648 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 HINFPQ9BQA5 517 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 MAGEB5Q9BZ81 275 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 LCMT1Q9UIC8 334 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 ZSCAN5CA6NGD5 496 aaPredicted RBP8.65□□□□□ -1.03
BRCA1-208ENST00000468300 TADA2AO75478 443 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 CD48P09326 243 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 CYP2F1P24903 491 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 PCK1P35558 622 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 PAFAH1B1P43034 410 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 ACADSBP45954 432 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 SLC7A5Q01650 507 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 ACAP1Q15027 740 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 LLGL1Q15334 1064 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 ARTNQ5T4W7 220 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 WDR93Q6P2C0 686 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 METTL23Q86XA0 190 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 ARL10Q8N8L6 244 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 EXD1Q8NHP7 514 aa8.65□□□□□ -1.03
BRCA1-208ENST00000468300 FAM193BQ96PV7 902 aaPredicted RBP8.65□□□□□ -1.03
BRCA1-208ENST00000468300 DDX23Q9BUQ8 820 aaKnown RBP8.65□□□□□ -1.03
BRCA1-208ENST00000468300 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.03
BRCA1-208ENST00000468300 PRDM5Q9NQX1 630 aaPredicted RBP8.65□□□□□ -1.03
BRCA1-208ENST00000468300 R3HDM2Q9Y2K5 976 aaKnown RBP8.65□□□□□ -1.03
BRCA1-208ENST00000468300 RANBP2P49792 3224 aaKnown RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 TARSL2A2RTX5 802 aaKnown RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 YJEFN3A6XGL0 299 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 E7ENQ6 273 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 I6L893 689 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 ADAM12O43184 909 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 RAD51CO43502 376 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 PDGFRAP16234 1089 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 IL4RP24394 825 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 PTPN7P35236 360 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 CDKN2BP42772 138 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 PTGIRP43119 386 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 PTPN9P43378 593 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 TKTL1P51854 596 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 EIF4EBP2Q13542 120 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 LONRF2Q1L5Z9 754 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 SMTNL2Q2TAL5 461 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 SLC39A12Q504Y0 691 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 KCNT1Q5JUK3 1230 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 FAM171A1Q5VUB5 890 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 SYPL2Q5VXT5 272 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 MFSD7Q6UXD7 560 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 CMASQ8NFW8 434 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 KRT12Q99456 494 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 CNPY3Q9BT09 278 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 MED10Q9BTT4 135 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 TMEM106CQ9BVX2 250 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 DDX47Q9H0S4 455 aaKnown RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 CHST7Q9NS84 486 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 REV3LO60673 3130 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 PI4K2BG5E9Z4 385 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 KRIT1O00522 736 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 SART1O43290 800 aaKnown RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 ZMYND10O75800 440 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 RALAP11233 206 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 ECHS1P30084 290 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 GPR15P49685 360 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 DAOAP59103 153 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 SCML4Q8N228 414 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 C12orf50Q8NA57 414 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-208ENST00000468300 STKLD1Q8NE28 680 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 SCAMP5Q8TAC9 235 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 FAM71BQ8TC56 605 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 IL23AQ9NPF7 189 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 ANLNQ9NQW6 1124 aa8.64□□□□□ -1.03
BRCA1-208ENST00000468300 USP18Q9UMW8 372 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms