RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTNS-205ENST00000467663 AJAP1Q9UKB5 411 aaPredicted RBP12.74□□□□□ -0.37
CTNS-205ENST00000467663 CDH9Q9ULB4 789 aa12.74□□□□□ -0.37
CTNS-205ENST00000467663 MRPS17Q9Y2R5 130 aaKnown RBP12.74□□□□□ -0.37
CTNS-205ENST00000467663 PCDHB4Q9Y5E5 795 aa12.74□□□□□ -0.37
CTNS-205ENST00000467663 SOBPA7XYQ1 873 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 NCAM2O15394 837 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 MED7O43513 233 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 KRT86O43790 486 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 GFRA3O60609 400 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 TACC1O75410 805 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 KRT5P13647 590 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 CYP11B1P15538 503 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 CYP2F1P24903 491 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 TARSP26639 723 aaKnown RBP12.73□□□□□ -0.37
CTNS-205ENST00000467663 CLCN1P35523 988 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 USP8P40818 1118 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 MAGEA11P43364 429 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 ASPAP45381 313 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 RPS9P46781 194 aaKnown RBP12.73□□□□□ -0.37
CTNS-205ENST00000467663 GPR15P49685 360 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 CYP4F8P98187 520 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 ARID5AQ03989 594 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 INCA1Q0VD86 236 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 FZD5Q13467 585 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 STILQ15468 1287 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 DDR2Q16832 855 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 CCDC142Q17RM4 750 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 SPOPLQ6IQ16 392 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 ZNF571Q7Z3V5 609 aaPredicted RBP12.73□□□□□ -0.37
CTNS-205ENST00000467663 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
CTNS-205ENST00000467663 EPS8L1Q8TE68 723 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 TRMT2BQ96GJ1 504 aaKnown RBP12.73□□□□□ -0.37
CTNS-205ENST00000467663 MYRFLQ96LU7 910 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 LRRC3BQ96PB8 259 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 GCNAQ96QF7 691 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 AGPAT1Q99943 283 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 SYT11Q9BT88 431 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 SLC46A2Q9BY10 475 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 CRTAC1Q9NQ79 661 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 CISHQ9NSE2 258 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 MYO1AQ9UBC5 1043 aa12.73□□□□□ -0.37
CTNS-205ENST00000467663 DPYSL4O14531 572 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 PJA2O43164 708 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 CYP26A1O43174 497 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 ATP2C2O75185 946 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 PRAMEF12O95522 483 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 SP9P0CG40 484 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 DDX6P26196 483 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTNS-205ENST00000467663 MAGEA1P43355 309 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 VAV2P52735 878 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 ZNF132P52740 706 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 CDR2Q01850 454 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 KIF5AQ12840 1032 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 MAPRE1Q15691 268 aaKnown RBP12.72□□□□□ -0.37
CTNS-205ENST00000467663 ARHGAP29Q52LW3 1261 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 ALKBH5Q6P6C2 394 aaKnown RBP12.72□□□□□ -0.37
CTNS-205ENST00000467663 TMEM270Q6UE05 265 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 C4orf50Q6ZRC1 276 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 KIAA1328Q86T90 577 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 GPIHBP1Q8IV16 184 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 YAF2Q8IY57 180 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 MAML2Q8IZL2 1156 aaPredicted RBP12.72□□□□□ -0.37
CTNS-205ENST00000467663 CMTM8Q8IZV2 173 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 RBBP8NLQ8NC74 664 aaPredicted RBP12.72□□□□□ -0.37
CTNS-205ENST00000467663 SLC30A5Q8TAD4 765 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 KAT5Q92993 513 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 CEP295NLQ96MC4 621 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 MMS19Q96T76 1030 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 MRPL45Q9BRJ2 306 aaKnown RBP12.72□□□□□ -0.37
CTNS-205ENST00000467663 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.72□□□□□ -0.37
CTNS-205ENST00000467663 ZNF518BQ9C0D4 1074 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 UXTQ9UBK9 157 aaPredicted RBP12.72□□□□□ -0.37
CTNS-205ENST00000467663 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
CTNS-205ENST00000467663 ADAMTS1Q9UHI8 967 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 NAGPAQ9UK23 515 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 PIAS3Q9Y6X2 628 aa12.72□□□□□ -0.37
CTNS-205ENST00000467663 COL4A2P08572 1712 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 PRR23AA6NEV1 266 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 SLC38A8A6NNN8 435 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 BTNL10A8MVZ5 291 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 CILPO75339 1184 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 PDGFRBP09619 1106 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 GNL1P36915 607 aaPredicted RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 PSMC1P62191 440 aaKnown RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 IFI16Q16666 785 aaKnown RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 C1orf228Q6PIY5 440 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 VSTM1Q6UX27 236 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 TOGARAM2Q6ZUX3 1019 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 ASCL5Q7RTU5 278 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 RNF10Q8N5U6 811 aaKnown RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 CELF5Q8N6W0 485 aaKnown RBP12.71□□□□□ -0.37
CTNS-205ENST00000467663 STKLD1Q8NE28 680 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 MYCBPAPQ8TBZ2 947 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 BPIFB1Q8TDL5 484 aa12.71□□□□□ -0.37
CTNS-205ENST00000467663 FAM3CQ92520 227 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms