RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TLL1O43897 1013 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 TBC1D4O60343 1298 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 ARHGEF15O94989 841 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 SETSIPP0DME0 302 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 NR1D1P20393 614 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 MAGEA10P43363 369 aaPredicted RBP19.51■□□□□ 0.71
CAPN3-209ENST00000466222 ZNF252P-AS1Q0IIN9 211 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 FIBCD1Q8N539 461 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 ATAD1Q8NBU5 361 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 FEZF2Q8TBJ5 459 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 DNAI2Q9GZS0 605 aa19.51■□□□□ 0.71
CAPN3-209ENST00000466222 METTL5Q9NRN9 209 aaKnown RBP19.51■□□□□ 0.71
CAPN3-209ENST00000466222 A0A087WUV0 522 aaPredicted RBP19.5■□□□□ 0.71
CAPN3-209ENST00000466222 TMEM191CA6NGB0 347 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 CSPG5O95196 566 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 KRT3P12035 628 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 LAG3P18627 525 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 COMTP21964 271 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 CCT5P48643 541 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 ELAVL2Q12926 359 aaKnown RBP19.5■□□□□ 0.71
CAPN3-209ENST00000466222 USP41Q3LFD5 358 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 FAM102AQ5T9C2 384 aaPredicted RBP19.5■□□□□ 0.71
CAPN3-209ENST00000466222 ZNF280DQ6N043 979 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 SPATA2LQ8IUW3 424 aaPredicted RBP19.5■□□□□ 0.71
CAPN3-209ENST00000466222 IPO4Q8TEX9 1081 aaKnown RBP19.5■□□□□ 0.71
CAPN3-209ENST00000466222 MCRS1Q96EZ8 462 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 TMEM169Q96HH4 297 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 RAD9AQ99638 391 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 RAB17Q9H0T7 212 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 CHST7Q9NS84 486 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 SPG21Q9NZD8 308 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 CDY1Q9Y6F8 540 aa19.5■□□□□ 0.71
CAPN3-209ENST00000466222 SOAT2O75908 522 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 DNAJB2P25686 324 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 HSD17B3P37058 310 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 GPR15P49685 360 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 ADIGQ0VDE8 80 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 ZNF268Q14587 947 aaPredicted RBP19.49■□□□□ 0.71
CAPN3-209ENST00000466222 SHHQ15465 462 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 SDHAF4Q5VUM1 108 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 TRNP1Q6NT89 227 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 PPP1R2P3Q6NXS1 205 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 DCUN1D2Q6PH85 259 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 OLFML1Q6UWY5 402 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 STK32AQ8WU08 396 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 KHSRPQ92945 711 aaKnown RBP eCLIP19.49■□□□□ 0.71
CAPN3-209ENST00000466222 SMARCD1Q96GM5 515 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 AP1M1Q9BXS5 423 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 CRISPLD1Q9H336 500 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 MRPL47Q9HD33 250 aaKnown RBP19.49■□□□□ 0.71
CAPN3-209ENST00000466222 STRIP2Q9ULQ0 834 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 SLC27A5Q9Y2P5 690 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 UTP11Q9Y3A2 253 aaKnown RBP19.49■□□□□ 0.71
CAPN3-209ENST00000466222 GOLGA6L10A0A0M3HER8 536 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 HHLA1C9JL84 531 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 F8VP50 259 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 DDX3YO15523 660 aaKnown RBP19.49■□□□□ 0.71
CAPN3-209ENST00000466222 VNN2O95498 520 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 CPP00450 1065 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 MYZAPP0CAP1 466 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 RPL34P49207 117 aaKnown RBP19.49■□□□□ 0.71
CAPN3-209ENST00000466222 CEP85LQ5SZL2 805 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 RASIP1Q5U651 963 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 KIAA1841Q6NSI8 718 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 RNF19BQ6ZMZ0 732 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 DDX47Q9H0S4 455 aaKnown RBP19.49■□□□□ 0.71
CAPN3-209ENST00000466222 SCINQ9Y6U3 715 aa19.49■□□□□ 0.71
CAPN3-209ENST00000466222 SIGLEC16A6NMB1 481 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 MIF4GDA9UHW6 222 aaKnown RBP19.48■□□□□ 0.71
CAPN3-209ENST00000466222 MYO1FO00160 1098 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 SOD2P04179 222 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 CPB1P15086 417 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 TCF4P15884 667 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 MARCKSL1P49006 195 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 AGBL2Q5U5Z8 902 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 C11orf63Q6NUN7 778 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 ANKS3Q6ZW76 656 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 SH2D3CQ8N5H7 860 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 CSNK1G1Q9HCP0 422 aa19.48■□□□□ 0.71
CAPN3-209ENST00000466222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.48■□□□□ 0.71
CAPN3-209ENST00000466222 FNDC1Q4ZHG4 1894 aaPredicted RBP19.47■□□□□ 0.71
CAPN3-209ENST00000466222 FAM187AA6NFU0 413 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 FGF18O76093 207 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 FLT3P36888 993 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 SLC8A3P57103 927 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 DDR2Q16832 855 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 RAB6CQ53S08 254 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 SH3PXD2AQ5TCZ1 1133 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 KCTD16Q68DU8 428 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 DCP1BQ8IZD4 617 aaKnown RBP19.47■□□□□ 0.71
CAPN3-209ENST00000466222 VPS52Q8N1B4 723 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 KLHL23Q8NBE8 558 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 FBXO22Q8NEZ5 403 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 GPR152Q8TDT2 470 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 KRT35Q92764 455 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 HSFY1Q96LI6 401 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 RNPC3Q96LT9 517 aaKnown RBP19.47■□□□□ 0.71
CAPN3-209ENST00000466222 SLC9A7Q96T83 725 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 RAB6CQ9H0N0 254 aa19.47■□□□□ 0.71
CAPN3-209ENST00000466222 EPN3Q9H201 632 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms