RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 BPIFB1Q8TDL5 484 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 EPS8L1Q8TE68 723 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 PCMTD1Q96MG8 357 aaPredicted RBP21.38■■□□□ 1.01
SKA3-205ENST00000465471 TRMT61BQ9BVS5 477 aaKnown RBP21.38■■□□□ 1.01
SKA3-205ENST00000465471 ULBP1Q9BZM6 244 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 LHX5Q9H2C1 402 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 CCSER2Q9H7U1 834 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 LRRC4Q9HBW1 653 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 CNGB3Q9NQW8 809 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.38■■□□□ 1.01
SKA3-205ENST00000465471 CLIC5Q9NZA1 410 aa21.38■■□□□ 1.01
SKA3-205ENST00000465471 DPYSL4O14531 572 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 ABL1P00519 1130 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 RGS7P49802 495 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 KLHDC10Q6PID8 442 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 WDTC1Q8N5D0 677 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 ZFRQ96KR1 1074 aaKnown RBP21.37■■□□□ 1.01
SKA3-205ENST00000465471 SLC4A5Q9BY07 1137 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 TTYH3Q9C0H2 523 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 TRPV5Q9NQA5 729 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 WNT16Q9UBV4 365 aa21.37■■□□□ 1.01
SKA3-205ENST00000465471 TICRRQ7Z2Z1 1910 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 CHADO15335 359 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 TLR5O60602 858 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 UBASH3AP57075 661 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 DAOAP59103 153 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 NOP9Q86U38 636 aaKnown RBP21.36■■□□□ 1.01
SKA3-205ENST00000465471 ARHGAP18Q8N392 663 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 BAP1Q92560 729 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 DNASE1L2Q92874 299 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 SPAG5Q96R06 1193 aa21.36■■□□□ 1.01
SKA3-205ENST00000465471 NOCTQ9UK39 431 aaKnown RBP21.36■■□□□ 1.01
SKA3-205ENST00000465471 GFPT2O94808 682 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 GDI1P31150 447 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 CDH5P33151 784 aaPredicted RBP21.35■■□□□ 1.01
SKA3-205ENST00000465471 STAT1P42224 750 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 PDCLQ13371 301 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 ARHGAP29Q52LW3 1261 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 TMEM110Q86TL2 294 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 SIX6OS1Q8N1H7 587 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 KIAA1958Q8N8K9 716 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 IRGQQ8WZA9 623 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 NAGPAQ9UK23 515 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 MYO6Q9UM54 1294 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 CPQQ9Y646 472 aa21.35■■□□□ 1.01
SKA3-205ENST00000465471 TMEM221A6NGB7 291 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 YJEFN3A6XGL0 299 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 E7ENQ6 273 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 M0R296 226 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 LEFTY2O00292 366 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 GPR37L1O60883 481 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 FBXO21O94952 628 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 RARGP13631 454 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 LCP1P13796 627 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 KRT9P35527 623 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 ACADSBP45954 432 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 YWHAGP61981 247 aaKnown RBP eCLIP21.34■■□□□ 1.01
SKA3-205ENST00000465471 PFKPQ01813 784 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 FIGNQ5HY92 759 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 ZNF677Q86XU0 584 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 RNF214Q8ND24 703 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 SH3RF2Q8TEC5 729 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 NDRG1Q92597 394 aaKnown RBP21.34■■□□□ 1.01
SKA3-205ENST00000465471 IRF7Q92985 503 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 FAM83CQ9BQN1 747 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 BRD9Q9H8M2 597 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 IFNKQ9P0W0 207 aa21.34■■□□□ 1.01
SKA3-205ENST00000465471 ZNF263O14978 683 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 TBX18O95935 607 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 MBL2P11226 248 aaPredicted RBP21.33■■□□□ 1.01
SKA3-205ENST00000465471 PLCB2Q00722 1185 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 MTF1Q14872 753 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 IER5LQ5T953 404 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 BMP8AQ7Z5Y6 402 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 PASD1Q8IV76 773 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 YAF2Q8IY57 180 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 C1orf131Q8NDD1 294 aaKnown RBP21.33■■□□□ 1.01
SKA3-205ENST00000465471 CLEC4CQ8WTT0 213 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 CPXM1Q96SM3 734 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 CDK5RAP1Q96SZ6 601 aaKnown RBP21.33■■□□□ 1.01
SKA3-205ENST00000465471 C1QTNF1Q9BXJ1 281 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 EDEM3Q9BZQ6 932 aa21.33■■□□□ 1.01
SKA3-205ENST00000465471 COL4A3Q01955 1670 aa21.33■■□□□ 1
SKA3-205ENST00000465471 KRBA1A5PL33 1030 aa21.32■■□□□ 1
SKA3-205ENST00000465471 E5RJQ4 531 aa21.32■■□□□ 1
SKA3-205ENST00000465471 PIK3R2O00459 728 aa21.32■■□□□ 1
SKA3-205ENST00000465471 PAPSS1O43252 624 aaPredicted RBP21.32■■□□□ 1
SKA3-205ENST00000465471 RALAP11233 206 aa21.32■■□□□ 1
SKA3-205ENST00000465471 CHRNB2P17787 502 aa21.32■■□□□ 1
SKA3-205ENST00000465471 ATP5C1P36542 298 aaKnown RBP21.32■■□□□ 1
SKA3-205ENST00000465471 CDR2Q01850 454 aa21.32■■□□□ 1
SKA3-205ENST00000465471 HFE2Q6ZVN8 426 aa21.32■■□□□ 1
SKA3-205ENST00000465471 CACNA2D4Q7Z3S7 1137 aa21.32■■□□□ 1
SKA3-205ENST00000465471 TADA2BQ86TJ2 420 aa21.32■■□□□ 1
SKA3-205ENST00000465471 DDX42Q86XP3 938 aaKnown RBP eCLIP21.32■■□□□ 1
SKA3-205ENST00000465471 SLC20A1Q8WUM9 679 aa21.32■■□□□ 1
SKA3-205ENST00000465471 ZFYVE19Q96K21 471 aa21.32■■□□□ 1
SKA3-205ENST00000465471 KLF16Q9BXK1 252 aaPredicted RBP21.32■■□□□ 1
SKA3-205ENST00000465471 ARHGEF3Q9NR81 526 aa21.32■■□□□ 1
SKA3-205ENST00000465471 ST7Q9NRC1 585 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms