RNA–Protein interactions for RNA: ENST00000464756.6

NFXL1-203, Transcript of nuclear transcription factor, X-box binding like 1, humanhuman

TSL 1 (best)

Gene NFXL1, Length 3,865 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFXL1-203ENST00000464756 NR2E3Q9Y5X4 410 aa13.32□□□□□ -0.28
NFXL1-203ENST00000464756 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 TMEM191CA6NGB0 347 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 FZD9O00144 591 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 PDHA1P08559 390 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 ADRA1DP25100 572 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 RPL22P35268 128 aaKnown RBP13.31□□□□□ -0.28
NFXL1-203ENST00000464756 ZNF268Q14587 947 aaPredicted RBP13.31□□□□□ -0.28
NFXL1-203ENST00000464756 TAF1BQ53T94 588 aaPredicted RBP13.31□□□□□ -0.28
NFXL1-203ENST00000464756 SH3PXD2AQ5TCZ1 1133 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 RMDN2Q96LZ7 410 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 MRPL45Q9BRJ2 306 aaKnown RBP13.31□□□□□ -0.28
NFXL1-203ENST00000464756 LRRC19Q9H756 370 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 ITGA11Q9UKX5 1188 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.31□□□□□ -0.28
NFXL1-203ENST00000464756 TRAPPC3O43617 180 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 KCNA3P22001 575 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 SCTRP47872 440 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 GLRBP48167 497 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 PTK6Q13882 451 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 GLB1LQ6UWU2 654 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 ST6GALNAC4Q9H4F1 302 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 SP110Q9HB58 689 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 UBA6A0AVT1 1052 aaPredicted RBP13.31□□□□□ -0.28
NFXL1-203ENST00000464756 SIGLEC16A6NMB1 481 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 SCAMP3O14828 347 aaKnown RBP13.31□□□□□ -0.28
NFXL1-203ENST00000464756 ERBB2P04626 1255 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 PRAMEP78395 509 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 EML3Q32P44 896 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 KBTBD12Q3ZCT8 623 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 MTHFD1LQ6UB35 978 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 TCP10LQ8TDR4 215 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 MANSC1Q9H8J5 431 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 FAM8A1Q9UBU6 413 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 SLC39A10Q9ULF5 831 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 USH1CQ9Y6N9 552 aa13.31□□□□□ -0.28
NFXL1-203ENST00000464756 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 PCSK1P29120 753 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 SCNN1GP51170 649 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 PHF13Q86YI8 300 aaPredicted RBP13.3□□□□□ -0.28
NFXL1-203ENST00000464756 AFAP1L2Q8N4X5 818 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 ATP8B3O60423 1300 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 BGNP21810 368 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 SOX11P35716 441 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 WNT7BP56706 349 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 SKOR1P84550 965 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 BST2Q10589 180 aaKnown RBP13.3□□□□□ -0.28
NFXL1-203ENST00000464756 ZCCHC23Q6ZST2 131 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 EP400NLQ6ZTU2 488 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 PLPPR4Q7Z2D5 763 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 MREGQ8N565 214 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 ATP6V1E2Q96A05 226 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 SNRNP25Q9BV90 132 aaKnown RBP13.3□□□□□ -0.28
NFXL1-203ENST00000464756 EIF2AQ9BY44 585 aaKnown RBP13.3□□□□□ -0.28
NFXL1-203ENST00000464756 COL4A1P02462 1669 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 C3orf70A6NLC5 250 aaPredicted RBP13.3□□□□□ -0.28
NFXL1-203ENST00000464756 GRIN3BO60391 1043 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 LRCH4O75427 683 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 ENDOD1O94919 500 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 SMIM10L2AP0DMW4 78 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 SMIM10L2BP0DMW5 78 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 AVPR1AP37288 418 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 RGS2P41220 211 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 FAAP100Q0VG06 881 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 STX3Q13277 289 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 EFTUD2Q15029 972 aaKnown RBP eCLIP13.3□□□□□ -0.286e-8■■■■□ 24.2
NFXL1-203ENST00000464756 PDK1Q15118 436 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 CNGA2Q16280 664 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 ERMARDQ5T6L9 678 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 MON1BQ7L1V2 547 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 PIGZQ86VD9 579 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 BORCS6Q96GS4 357 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 SYT15Q9BQS2 421 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 HEY2Q9UBP5 337 aa13.3□□□□□ -0.28
NFXL1-203ENST00000464756 GLI3P10071 1580 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 ATP4AP20648 1035 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 ATICP31939 592 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 ELF1P32519 619 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 ACADSBP45954 432 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 PSEN2P49810 448 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 ATN1P54259 1190 aaPredicted RBP13.29□□□□□ -0.28
NFXL1-203ENST00000464756 YWHAZP63104 245 aaKnown RBP13.29□□□□□ -0.28
NFXL1-203ENST00000464756 USP10Q14694 798 aaKnown RBP13.29□□□□□ -0.28
NFXL1-203ENST00000464756 FSCN1Q16658 493 aaKnown RBP13.29□□□□□ -0.28
NFXL1-203ENST00000464756 TFAP2DQ7Z6R9 452 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 ATPAF2Q8N5M1 289 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 PGM2Q96G03 612 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 TMEM237Q96Q45 408 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
NFXL1-203ENST00000464756 RPTORQ8N122 1335 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 hCG_1818297A0A087WSY0 165 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 TREHO43280 583 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 BDNFP23560 247 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 RPA3P35244 121 aaPredicted RBP13.29□□□□□ -0.28
NFXL1-203ENST00000464756 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
NFXL1-203ENST00000464756 NSUN2Q08J23 767 aaKnown RBP eCLIP13.29□□□□□ -0.28
NFXL1-203ENST00000464756 SH2D4BQ5SQS7 431 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms