RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 L1CAMP32004 1257 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CRHR1P34998 444 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 RGS2P41220 211 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 GRIA2P42262 883 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 RANBP1P43487 201 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CHN2P52757 468 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 AP3M2P53677 418 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 ALDH18A1P54886 795 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 YWHAZP63104 245 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 TUBB3Q13509 450 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CCNIQ14094 377 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SFT2D3Q587I9 215 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 MDH1BQ5I0G3 518 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SH2D4BQ5SQS7 431 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 STXBP5Q5T5C0 1151 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CES4AQ5XG92 561 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SLFN12LQ6IEE8 588 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 PGM2L1Q6PCE3 622 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SPATA24Q86W54 205 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 ALDH16A1Q8IZ83 802 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 FAM71DQ8N9W8 422 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 GSTCDQ8NEC7 633 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SYTL5Q8TDW5 730 aaPredicted RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 ATP6V0A1Q93050 837 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 AGBL1Q96MI9 1066 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 NLRP4Q96MN2 994 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 MECRQ9BV79 373 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 FAM96AQ9H5X1 160 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 TDRD3Q9H7E2 651 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 C10orf88Q9H8K7 445 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 DBNDD1Q9H9R9 158 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 XPNPEP1Q9NQW7 623 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 THAP1Q9NVV9 213 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 SAE1Q9UBE0 346 aaPredicted RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 CIDEBQ9UHD4 219 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 GMEB1Q9Y692 573 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SF3B1O75533 1304 aaKnown RBP eCLIP7.58□□□□□ -1.21e-8■■■■■ 103.4
USP48-206ENST00000464577 ZNF541Q9H0D2 1346 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 IRF6O14896 467 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 KRT38O76015 456 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 TMCC1O94876 653 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 ASS1P00966 412 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 ASLP04424 464 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 C6orf222P0C671 652 aaPredicted RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 RBP3P10745 1247 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 MYL4P12829 197 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 VCLP18206 1134 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 IL1R2P27930 398 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 ALDH1B1P30837 517 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 POLR2BP30876 1174 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 CAP2P40123 477 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 MAGEA6P43360 314 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SERPINB9P50453 376 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 ROR1Q01973 937 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CNTN2Q02246 1040 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 STX3Q13277 289 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 NCOA4Q13772 614 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 R3HDM1Q15032 1099 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 PGM5Q15124 567 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 NOMO1Q15155 1222 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 XRRA1Q6P2D8 792 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 UGT2A3Q6UWM9 527 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 RNF111Q6ZNA4 994 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 TIFABQ6ZNK6 161 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 RFX6Q8HWS3 928 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CCDC33Q8N5R6 958 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 ARFGAP1Q8N6T3 406 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 PPM1NQ8N819 430 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CMASQ8NFW8 434 aaPredicted RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 ACTRT2Q8TDY3 377 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 GDPD5Q8WTR4 605 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 LRRC39Q96DD0 335 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 DGCR14Q96DF8 476 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 CFAP36Q96G28 342 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 MASTLQ96GX5 879 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 HIC2Q96JB3 615 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 RILPQ96NA2 401 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 IMPG2Q9BZV3 1241 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 POLR3FQ9H1D9 316 aaPredicted RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 POPDC2Q9HBU9 364 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 XAB2Q9HCS7 855 aaKnown RBP7.58□□□□□ -1.2
USP48-206ENST00000464577 FBXO28Q9NVF7 368 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 PLK2Q9NYY3 685 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 PAK5Q9P286 719 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 SLC9A2Q9UBY0 812 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 PCDHA10Q9Y5I2 948 aa7.58□□□□□ -1.2
USP48-206ENST00000464577 CNTNAP2Q9UHC6 1331 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 CCDC195A0A1B0GUA6 201 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 TTLL13PA6NNM8 815 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 ZNF862O60290 1169 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 FAM189A1O60320 539 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 SMIM18P0DKX4 95 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 PRDX6P30041 224 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 ACOT2P49753 483 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 COPAP53621 1224 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 AQP4P55087 323 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 SOX10P56693 466 aa7.57□□□□□ -1.2
USP48-206ENST00000464577 MMRN1Q13201 1228 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms