RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 TCF7L1Q9HCS4 588 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 TRIM36Q9NQ86 728 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 AASDHPPTQ9NRN7 309 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 SELENONQ9NZV5 590 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 CPA4Q9UI42 421 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 ANKRD6Q9Y2G4 727 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 STXBP5LQ9Y2K9 1186 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 MRPS17Q9Y2R5 130 aaKnown RBP3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 MED16Q9Y2X0 877 aa3.01□□□□□ -1.93
NDUFA4-202ENST00000463308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.01□□□□□ -1.932e-8■■■□□ 14.9
NDUFA4-202ENST00000463308 A0A1W2PPL8 197 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 TBC1D4O60343 1298 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 PMPCBO75439 489 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 PF4V1P10720 104 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 SLC11A2P49281 568 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 ALDH7A1P49419 539 aaKnown RBP3□□□□□ -1.93
NDUFA4-202ENST00000463308 TXNL4AP83876 142 aaKnown RBP3□□□□□ -1.93
NDUFA4-202ENST00000463308 FGL2Q14314 439 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 CYP1B1Q16678 543 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 PTPROQ16827 1216 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 FAM110CQ1W6H9 321 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 ATAT1Q5SQI0 421 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 TMTC4Q5T4D3 741 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 ZNF549Q6P9A3 640 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 DPY19L3Q6ZPD9 716 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 B4GALNT4Q76KP1 1039 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 GAS2L3Q86XJ1 694 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 LIX1LQ8IVB5 337 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 SLC15A4Q8N697 577 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 MAFAQ8NHW3 353 aaPredicted RBP3□□□□□ -1.93
NDUFA4-202ENST00000463308 ZNF398Q8TD17 642 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 BPIFB1Q8TDL5 484 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 JPH3Q8WXH2 748 aaPredicted RBP3□□□□□ -1.93
NDUFA4-202ENST00000463308 PPP2R3CQ969Q6 453 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 HOOK2Q96ED9 719 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 C1GALT1C1Q96EU7 318 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 PPP1R9BQ96SB3 815 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 MEIS3Q99687 375 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 MS4A7Q9GZW8 240 aaPredicted RBP3□□□□□ -1.93
NDUFA4-202ENST00000463308 MRPL44Q9H9J2 332 aaKnown RBP3□□□□□ -1.93
NDUFA4-202ENST00000463308 DECR2Q9NUI1 292 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 ARL8BQ9NVJ2 186 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 MGAT4CQ9UBM8 478 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 DRG1Q9Y295 367 aaKnown RBP3□□□□□ -1.93
NDUFA4-202ENST00000463308 SNX14Q9Y5W7 946 aa3□□□□□ -1.93
NDUFA4-202ENST00000463308 A0A088AWK7 358 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 IGLV5-39A0A0G2JS06 123 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 TCRBV5S1A1TA0A578 114 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 INPPL1O15357 1258 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 SMAD6O43541 496 aaKnown RBP2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 OFD1O75665 1012 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 RASAL1O95294 804 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 CSF1RP07333 972 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 CTSAP10619 480 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 NEK2P51955 445 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 BCAT1P54687 386 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 SLC12A2P55011 1212 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 LMAN2Q12907 356 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 ZNF267Q14586 743 aaPredicted RBP2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 ST3GAL2Q16842 350 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 PLA1AQ53H76 456 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 DCAF12L1Q5VU92 463 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 CACHD1Q5VU97 1274 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 TRAPPC11Q7Z392 1133 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 DAAM2Q86T65 1068 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 ZNF280BQ86YH2 543 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 DCP1BQ8IZD4 617 aaKnown RBP2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 MMP21Q8N119 569 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 DNAJC5GQ8N7S2 189 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 GPATCH3Q96I76 525 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 ZC3H10Q96K80 434 aaKnown RBP2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 NUP88Q99567 741 aaPredicted RBP2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 MESP1Q9BRJ9 268 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 ZPBPQ9BS86 351 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 TMEM184CQ9NVA4 438 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 HEY2Q9UBP5 337 aa2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 ERRFI1Q9UJM3 462 aaPredicted RBP2.99□□□□□ -1.93
NDUFA4-202ENST00000463308 PHGDHO43175 533 aaKnown RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 SRGAP2O75044 1071 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 CNOT3O75175 753 aaKnown RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 TOMM40O96008 361 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 SLC3A2P08195 630 aaKnown RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 NCLP19338 710 aaKnown RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 IBSPP21815 317 aaPredicted RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 KCNA3P22001 575 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 TBXAS1P24557 533 aaPredicted RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 HOXD9P28356 352 aaPredicted RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 PGGT1BP53609 377 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 RHDQ02161 417 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 ASIC2Q16515 512 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 PRTGQ2VWP7 1150 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 ZIK1Q3SY52 487 aaPredicted RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 IFIT1BQ5T764 474 aaKnown RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 UBE2Q1Q7Z7E8 422 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 PNISRQ8TF01 805 aaKnown RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 TMEM171Q8WVE6 324 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 KBTBD7Q8WVZ9 684 aa2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 ZNF668Q96K58 619 aaPredicted RBP2.98□□□□□ -1.93
NDUFA4-202ENST00000463308 MRGPRX1Q96LB2 322 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms