RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 PCDHGA5Q9Y5G8 931 aa16.46■□□□□ 0.23
SF3A3-203ENST00000461869 TPRP12270 2363 aaKnown RBP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 EPHB6O15197 1021 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 EGFP01133 1207 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 C4BPAP04003 597 aaKnown RBP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 CCDC172P0C7W6 258 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 DDX6P26196 483 aaKnown RBP eCLIP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 TAF6P49848 677 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 CDK17Q00537 523 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 MEA1Q16626 185 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 PLA2G2CQ5R387 149 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 TDRD10Q5VZ19 366 aaKnown RBP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 WSCD1Q658N2 575 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 SMYD5Q6GMV2 418 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 RRAGAQ7L523 313 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 ENOSF1Q7L5Y1 443 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 TMEM150AQ86TG1 271 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 CAMKK1Q8N5S9 505 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 BAP1Q92560 729 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 USP13Q92995 863 aaPredicted RBP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 CHFRQ96EP1 664 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 ZC3H10Q96K80 434 aaKnown RBP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 SMOC1Q9H4F8 434 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 NLRC4Q9NPP4 1024 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 TDP1Q9NUW8 608 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 POLR3BQ9NW08 1133 aaPredicted RBP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 FHOD1Q9Y613 1164 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 ANK1P16157 1881 aa16.45■□□□□ 0.22
SF3A3-203ENST00000461869 KMT2BQ9UMN6 2715 aaPredicted RBP16.45■□□□□ 0.22
SF3A3-203ENST00000461869 LRRC53A6NM62 1247 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 RNF40O75150 1001 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 F11P03951 625 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 ARSAP15289 507 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 MPLP40238 635 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 WNT7BP56706 349 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 SHC2P98077 582 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 TFAMQ00059 246 aaKnown RBP16.44■□□□□ 0.22
SF3A3-203ENST00000461869 GOLGA8FQ08AF8 430 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 GOLGA8DPQ0D2H9 430 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 DPY19L2P1Q6NXN4 242 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
SF3A3-203ENST00000461869 DCP1BQ8IZD4 617 aaKnown RBP16.44■□□□□ 0.22
SF3A3-203ENST00000461869 LMO3Q8TAP4 145 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 TAS1R2Q8TE23 839 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 ZNF516Q92618 1163 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 STK33Q9BYT3 514 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 MTMR12Q9C0I1 747 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 KIF9Q9HAQ2 790 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 FBRSL1Q9HCM7 1045 aaKnown RBP16.44■□□□□ 0.22
SF3A3-203ENST00000461869 VPS45Q9NRW7 570 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 DPP3Q9NY33 737 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 KIF26AQ9ULI4 1882 aaPredicted RBP16.44■□□□□ 0.22
SF3A3-203ENST00000461869 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
SF3A3-203ENST00000461869 ACACBO00763 2458 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 ESPNB1AK53 854 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 CCP110O43303 1012 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 HLA-DRAP01903 254 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 HMGA1P17096 107 aaKnown RBP16.43■□□□□ 0.22
SF3A3-203ENST00000461869 DRD1P21728 446 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 STAT1P42224 750 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 GALK1P51570 392 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 MFAP3P55082 362 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 TRPC3Q13507 836 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 NCOA4Q13772 614 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 RAPGEF1Q13905 1077 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 LMBRD2Q68DH5 695 aaPredicted RBP16.43■□□□□ 0.22
SF3A3-203ENST00000461869 TXNDC8Q6A555 127 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 TRAPPC11Q7Z392 1133 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 TMEM139Q8IV31 216 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 OR5B17Q8NGF7 314 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 MRPS31Q92665 395 aaKnown RBP16.43■□□□□ 0.22
SF3A3-203ENST00000461869 TAF4BQ92750 862 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 HHIPQ96QV1 700 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 DNAJC12Q9UKB3 198 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 MAGED2Q9UNF1 606 aaPredicted RBP16.43■□□□□ 0.22
SF3A3-203ENST00000461869 R3HCC1Q9Y3T6 440 aaKnown RBP16.43■□□□□ 0.22
SF3A3-203ENST00000461869 PCDHB5Q9Y5E4 795 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 GREB1Q4ZG55 1949 aa16.43■□□□□ 0.22
SF3A3-203ENST00000461869 TSC2P49815 1807 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 EPG5Q9HCE0 2579 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 SOBPA7XYQ1 873 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 KPNA7A9QM74 516 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 RNF225M0QZC1 329 aaPredicted RBP16.42■□□□□ 0.22
SF3A3-203ENST00000461869 KCNK5O95279 499 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 FERP16591 822 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 GPR15P49685 360 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 JAM2P57087 298 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 GCNT1Q02742 428 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 PDGFRLQ15198 375 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 ASIC2Q16515 512 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 PLK5Q496M5 336 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 FBXO43Q4G163 708 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 MON1AQ86VX9 555 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 EFCAB13Q8IY85 973 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 CCDC170Q8IYT3 715 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 RIN3Q8TB24 985 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 EXOC4Q96A65 974 aa16.42■□□□□ 0.22
SF3A3-203ENST00000461869 JAKMIP2Q96AA8 810 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms