RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 IMPACTQ9P2X3 320 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 CDH7Q9ULB5 785 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 USTQ9Y2C2 406 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 CEP83Q9Y592 693 aa11.85□□□□□ -0.51
SSBP1-202ENST00000461433 NUP210Q8TEM1 1887 aaPredicted RBP11.85□□□□□ -0.51
SSBP1-202ENST00000461433 A0A1W2PQH9 124 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 OAS1P00973 400 aaKnown RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 LAMP2P13473 410 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 MMP8P22894 467 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 MRE11P49959 708 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 CDK17Q00537 523 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 C2CD6Q53TS8 623 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 TDRD12Q587J7 1177 aaKnown RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 HFE2Q6ZVN8 426 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 SIX6OS1Q8N1H7 587 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 IRGQQ8WZA9 623 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 KHSRPQ92945 711 aaKnown RBP eCLIP11.84□□□□□ -0.513e-11■■□□□ 12.1
SSBP1-202ENST00000461433 MCRS1Q96EZ8 462 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 NOX5Q96PH1 765 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 CYP2S1Q96SQ9 504 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 RNF38Q9H0F5 515 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 TLR8Q9NR97 1041 aaKnown RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 SEPT11Q9NVA2 429 aaKnown RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 ADAMTS1Q9UHI8 967 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 NENFQ9UMX5 172 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 FAM50BQ9Y247 325 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 HELZP42694 1942 aaKnown RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 A0A087X0T9 212 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 SOBPA7XYQ1 873 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 C2CD4DB7Z1M9 353 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 FBXO21O94952 628 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 OLFM2O95897 454 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 FYNP06241 537 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 FAM228BP0C875 321 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 GZMAP12544 262 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 FECHP22830 423 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 SP100P23497 879 aaPredicted RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 EIF4A3P38919 411 aaKnown RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 YWHAGP61981 247 aaKnown RBP eCLIP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 GPR158Q5T848 1215 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 FAM183BPQ6ZVS7 135 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 MON1BQ7L1V2 547 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 ERICH1Q86X53 443 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 XYLT1Q86Y38 959 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 DNAAF5Q86Y56 855 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 ZNF276Q8N554 614 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 MAB21L3Q8N8X9 362 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 MRPS31Q92665 395 aaKnown RBP11.84□□□□□ -0.51
SSBP1-202ENST00000461433 C18orf8Q96DM3 657 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 PANX2Q96RD6 677 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 TASP1Q9H6P5 420 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 CLIC5Q9NZA1 410 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 GDE1Q9NZC3 331 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 EPS15L1Q9UBC2 864 aa11.84□□□□□ -0.51
SSBP1-202ENST00000461433 SSU72P8A0A1W2PR75 194 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 LOC730098B7Z3J9 87 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ABL1P00519 1130 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 DDX6P26196 483 aaKnown RBP eCLIP11.83□□□□□ -0.52
SSBP1-202ENST00000461433 WEE1P30291 646 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 GBP2P32456 591 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-202ENST00000461433 PSEN1P49768 467 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ZP2Q05996 745 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 TAF5Q15542 800 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ARHGAP15Q53QZ3 475 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 BSPRYQ5W0U4 402 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 OLFML1Q6UWY5 402 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 MMS22LQ6ZRQ5 1243 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 OTOP3Q7RTS5 596 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ADHFE1Q8IWW8 467 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 CMTM8Q8IZV2 173 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ARL14EPQ8N8R7 260 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-202ENST00000461433 RPGRIP1Q96KN7 1286 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ASB16Q96NS5 453 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 GCNAQ96QF7 691 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ZNHIT6Q9NWK9 470 aaKnown RBP11.83□□□□□ -0.52
SSBP1-202ENST00000461433 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 NAGPAQ9UK23 515 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 NUDT5Q9UKK9 219 aa11.83□□□□□ -0.52
SSBP1-202ENST00000461433 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
SSBP1-202ENST00000461433 C19orf67A6NJJ6 358 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 TMCO5BA8MYB1 307 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 COCHO43405 550 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 TBX18O95935 607 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 RARGP13631 454 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 PFKLP17858 780 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 HDCP19113 662 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 FCARP24071 287 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 NSFP46459 744 aaKnown RBP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 TUBP50607 506 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ZXDBP98169 803 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 SLC6A3Q01959 620 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
SSBP1-202ENST00000461433 HECTD3Q5T447 861 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
SSBP1-202ENST00000461433 ZDHHC17Q8IUH5 632 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms