RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 P3H4Q92791 437 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 FAF2Q96CS3 445 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 XPO6Q96QU8 1125 aaKnown RBP21.1■□□□□ 0.97
CCM2-203ENST00000461377 CCDC77Q9BR77 488 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 ZNF670Q9BS34 389 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 A0A087WUV0 522 aaPredicted RBP21.1■□□□□ 0.97
CCM2-203ENST00000461377 TGM2P21980 687 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 CCDC38Q502W7 563 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 SLC9A4Q6AI14 798 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 DUSP16Q9BY84 665 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 ADAM33Q9BZ11 813 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 CTNNAL1Q9UBT7 734 aa21.1■□□□□ 0.97
CCM2-203ENST00000461377 APOL1O14791 398 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 ATP2C2O75185 946 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 PTPN1P18031 435 aaKnown RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 IGFBP6P24592 240 aaPredicted RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 STIP1P31948 543 aaKnown RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 PRKCZQ05513 592 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 CACNB2Q08289 660 aaPredicted RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 FASTKD3Q14CZ7 662 aaKnown RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 ANKRD22Q5VYY1 191 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 PIGZQ86VD9 579 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 PLD5Q8N7P1 536 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 ATXN2LQ8WWM7 1075 aaKnown RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 ARHGEF2Q92974 986 aaKnown RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 GAD1Q99259 594 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 EURLQ9NYK6 297 aa21.09■□□□□ 0.97
CCM2-203ENST00000461377 ABT1Q9ULW3 272 aaKnown RBP21.09■□□□□ 0.97
CCM2-203ENST00000461377 SMAPO00193 183 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 RDXP35241 583 aaKnown RBP21.08■□□□□ 0.97
CCM2-203ENST00000461377 EFHC1Q5JVL4 640 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 DARS2Q6PI48 645 aaKnown RBP21.08■□□□□ 0.97
CCM2-203ENST00000461377 C1orf228Q6PIY5 440 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 PAQR9Q6ZVX9 377 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 SRLQ86TD4 932 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 PCDH19Q8TAB3 1148 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 SENP8Q96LD8 212 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 XPNPEP3Q9NQH7 507 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.08■□□□□ 0.979e-7■■■■□ 19.3
CCM2-203ENST00000461377 GIT1Q9Y2X7 761 aa21.08■□□□□ 0.97
CCM2-203ENST00000461377 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.08■□□□□ 0.96
CCM2-203ENST00000461377 GPR182O15218 404 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 CDH16O75309 829 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 THP07101 528 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 ACAT1P24752 427 aaKnown RBP21.08■□□□□ 0.96
CCM2-203ENST00000461377 AFF1P51825 1210 aaKnown RBP21.08■□□□□ 0.96
CCM2-203ENST00000461377 DPYSL2Q16555 572 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 HIF1AQ16665 826 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 MRPL10Q7Z7H8 261 aaKnown RBP21.08■□□□□ 0.96
CCM2-203ENST00000461377 ZC3H18Q86VM9 953 aaKnown RBP21.08■□□□□ 0.96
CCM2-203ENST00000461377 LPPQ93052 612 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 AGO3Q9H9G7 860 aaKnown RBP21.08■□□□□ 0.96
CCM2-203ENST00000461377 MIOSQ9NXC5 875 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 CACNG4Q9UBN1 327 aa21.08■□□□□ 0.96
CCM2-203ENST00000461377 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.08■□□□□ 0.96
CCM2-203ENST00000461377 NPR3P17342 541 aa21.07■□□□□ 0.96
CCM2-203ENST00000461377 ATXN1P54253 815 aaKnown RBP21.07■□□□□ 0.96
CCM2-203ENST00000461377 ADCY1Q08828 1119 aa21.07■□□□□ 0.96
CCM2-203ENST00000461377 PDIA2Q13087 525 aaKnown RBP21.07■□□□□ 0.96
CCM2-203ENST00000461377 KIAA0319Q5VV43 1072 aa21.07■□□□□ 0.96
CCM2-203ENST00000461377 ZBED8Q8IZ13 594 aa21.07■□□□□ 0.96
CCM2-203ENST00000461377 RIBC1Q8N443 379 aaPredicted RBP21.07■□□□□ 0.96
CCM2-203ENST00000461377 KLHDC9Q8NEP7 349 aa21.07■□□□□ 0.96
CCM2-203ENST00000461377 KCTD13Q8WZ19 329 aa21.07■□□□□ 0.96
CCM2-203ENST00000461377 RRP15Q9Y3B9 282 aaKnown RBP21.07■□□□□ 0.96
CCM2-203ENST00000461377 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.07■□□□□ 0.96
CCM2-203ENST00000461377 H7C0C1 242 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 CLDN5O00501 218 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 ASGR1P07306 291 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 L1CAMP32004 1257 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 ATP5OP48047 213 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 ARL4CP56559 192 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 BCAR1P56945 870 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 SLC8A3P57103 927 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 GAD2Q05329 585 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 ADIGQ0VDE8 80 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 AGMOQ6ZNB7 445 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 B4GALNT4Q76KP1 1039 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 STRADAQ7RTN6 431 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 CYP4X1Q8N118 509 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 HHIPL1Q96JK4 782 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 USP29Q9HBJ7 922 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 NAALADL1Q9UQQ1 740 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 ARL5CA6NH57 179 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 E7ESA3 106 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 GOLGA8MH3BSY2 632 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 DAB1O75553 588 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 TMEM63AO94886 807 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 ALDH1A1P00352 501 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 MATKP42679 507 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 CLCNKBP51801 687 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 KCNA10Q16322 511 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 MDH1BQ5I0G3 518 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 CCSAPQ6IQ19 270 aaPredicted RBP21.06■□□□□ 0.96
CCM2-203ENST00000461377 CCDC13Q8IYE1 715 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 TMEM86AQ8N2M4 240 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 RTP4Q96DX8 246 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 OSBPL7Q9BZF2 842 aa21.06■□□□□ 0.96
CCM2-203ENST00000461377 INTS9Q9NV88 658 aaKnown RBP21.06■□□□□ 0.96
CCM2-203ENST00000461377 DDX43Q9NXZ2 648 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms