RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 GJB6O95452 261 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 IGFBP6P24592 240 aaPredicted RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 RPL7AP62424 266 aaKnown RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 C2orf54Q08AI8 447 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 TUSC3Q13454 348 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 PAN2Q504Q3 1202 aaKnown RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 WSCD1Q658N2 575 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 FAM117BQ6P1L5 589 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 FBXO46Q6PJ61 603 aaPredicted RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 DSTYKQ6XUX3 929 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 SLC39A5Q6ZMH5 540 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 NDUFAF2Q8N183 169 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 GPR161Q8N6U8 529 aaKnown RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 C3orf58Q8NDZ4 430 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 DBF4BQ8NFT6 615 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.85□□□□□ -0.67
HERC4-207ENST00000460168 FEZF2Q8TBJ5 459 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 TEKT4Q8WW24 435 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 LINC01599Q8WXQ3 324 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 YIPF3Q9GZM5 350 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 IP6K2Q9UHH9 426 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 CARD8Q9Y2G2 431 aa10.85□□□□□ -0.67
HERC4-207ENST00000460168 GOLGA8SH3BPF8 625 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 PGRMC1O00264 195 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 DDX3YO15523 660 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 RHOXF2BP0C7M4 288 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 HSPA1AP0DMV8 641 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 HSPA1BP0DMV9 641 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 CCNCP24863 283 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 RASA2Q15283 850 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 SEPT7Q16181 437 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 PLEKHG4Q58EX7 1191 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 ANKRD33Q7Z3H0 272 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 ZNF572Q7Z3I7 529 aaPredicted RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 URGCPQ8TCY9 931 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 SEPT8Q92599 483 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 DDX27Q96GQ7 796 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 RHOXF2Q9BQY4 288 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 PPP1R12CQ9BZL4 782 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 CARD9Q9H257 536 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 EPC1Q9H2F5 836 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 TJP2Q9UDY2 1190 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 PCSK1NQ9UHG2 260 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 CAPN7Q9Y6W3 813 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 LINC00854A0A1B0GVQ3 168 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 NDUFB5O43674 189 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 CCDC130P13994 396 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 WARSP23381 471 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 ADORA2BP29275 332 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 HOXD12P35452 270 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 SLC1A1P43005 524 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 MARCKSL1P49006 195 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 TAP1Q03518 808 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 RNASELQ05823 741 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 PPIDQ08752 370 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 SUZ12Q15022 739 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 LONRF1Q17RB8 773 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 MAP7D1Q3KQU3 841 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 ZCCHC8Q6NZY4 707 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 BZW1Q7L1Q6 419 aaKnown RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 LIMS2Q7Z4I7 341 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 CPNE8Q86YQ8 564 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 KIRREL3Q8IZU9 778 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 CRYBG2Q8N1P7 616 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 TMEM86AQ8N2M4 240 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 B3GALNT2Q8NCR0 500 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 ACTRT1Q8TDG2 376 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 HASPINQ8TF76 798 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 ALG3Q92685 438 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 KRT35Q92764 455 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 SCLYQ96I15 445 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 LPIN3Q9BQK8 851 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 RABEP2Q9H5N1 569 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 WDR35Q9P2L0 1181 aa10.84□□□□□ -0.67
HERC4-207ENST00000460168 TIMM13Q9Y5L4 95 aaPredicted RBP10.84□□□□□ -0.67
HERC4-207ENST00000460168 TARSL2A2RTX5 802 aaKnown RBP10.83□□□□□ -0.68
HERC4-207ENST00000460168 PIK3R2O00459 728 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 EBAG9O00559 213 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 MAP2K7O14733 419 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 RASSF9O75901 435 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 PROSCO94903 275 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 ERBB2P04626 1255 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 KRT3P12035 628 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 ACAT1P24752 427 aaKnown RBP10.83□□□□□ -0.68
HERC4-207ENST00000460168 CTNNA1P35221 906 aaKnown RBP10.83□□□□□ -0.68
HERC4-207ENST00000460168 LHX1P48742 406 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 CCL23P55773 120 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 TLE2Q04725 743 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 FAAP100Q0VG06 881 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 COX10Q12887 443 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 CAMK2BQ13554 666 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 NOMO2Q5JPE7 1267 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 CLLU1OSQ5K130 101 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 SH2D4BQ5SQS7 431 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 DCAF12L1Q5VU92 463 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 ARHGAP17Q68EM7 881 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 OSTM1Q86WC4 334 aa10.83□□□□□ -0.68
HERC4-207ENST00000460168 ABI1Q8IZP0 508 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms