RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 DCDC2CA8MYV0 355 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 APOC4-APOC2K7ER74 178 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 APOC2P02655 101 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 LHX1P48742 406 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 PPARDQ03181 441 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 IFFO1Q0D2I5 559 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 GPS1Q13098 491 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 GPRIN1Q7Z2K8 1008 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 CTU1Q7Z7A3 348 aaKnown RBP17.08■□□□□ 0.33
CAPN13-203ENST00000458085 FAM35AQ86V20 835 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 SLC43A3Q8NBI5 491 aa17.08■□□□□ 0.33
CAPN13-203ENST00000458085 GOLGA6L10A6NI86 522 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 DNALI1O14645 258 aaPredicted RBP17.08■□□□□ 0.32
CAPN13-203ENST00000458085 YY1P25490 414 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 SCNN1AP37088 669 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 ATP1A2P50993 1020 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 GRIK3Q13003 919 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 KRT81Q14533 505 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 BOLA3Q53S33 107 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 TTC19Q6DKK2 380 aaPredicted RBP17.08■□□□□ 0.32
CAPN13-203ENST00000458085 HFE2Q6ZVN8 426 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 UNC45BQ8IWX7 931 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 DEFB106AQ8N104 65 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 PQLC3Q8N755 202 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 FAM149B1Q96BN6 582 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 PGBD4Q96DM1 585 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 RNF157Q96PX1 679 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 BCCIPQ9P287 314 aaKnown RBP eCLIP17.08■□□□□ 0.32
CAPN13-203ENST00000458085 PTCH2Q9Y6C5 1203 aa17.08■□□□□ 0.32
CAPN13-203ENST00000458085 FAM200BP0CF97 657 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 GRK4P32298 578 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 MAP2K2P36507 400 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 MRPS5P82675 430 aaKnown RBP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 TUSC3Q13454 348 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 OTUD1Q5VV17 481 aaPredicted RBP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 CCDC185Q8N715 623 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 PCDH19Q8TAB3 1148 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 TEKT4Q8WW24 435 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 TSEN34Q9BSV6 310 aaKnown RBP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 ERICH4A6NGS2 130 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 HMGB1P1B2RPK0 211 aaPredicted RBP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 C9IYK1 514 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 NRP1O14786 923 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 CAND2O75155 1236 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 AP1G2O75843 785 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 ACSL3O95573 720 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 EIF3EP60228 445 aaKnown RBP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 GLIPR1L2Q4G1C9 344 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 PPP6R3Q5H9R7 873 aaPredicted RBP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 C1orf228Q6PIY5 440 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 ARCQ7LC44 396 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 SPATA18Q8TC71 538 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 SH3TC2Q8TF17 1288 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 KCTD13Q8WZ19 329 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 TMEM209Q96SK2 561 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 MAK16Q9BXY0 300 aaKnown RBP17.07■□□□□ 0.32
CAPN13-203ENST00000458085 LRRC4Q9HBW1 653 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 RGS18Q9NS28 235 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 CDH9Q9ULB4 789 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 SQORQ9Y6N5 450 aa17.07■□□□□ 0.32
CAPN13-203ENST00000458085 SMIM23A6NLE4 172 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 MDM4O15151 490 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 FKTNO75072 461 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 MAP3K6O95382 1288 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 RBP3P10745 1247 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 CAPN2P17655 700 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 MATKP42679 507 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 TKTL1P51854 596 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 SLC8A3P57103 927 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 CAV1Q03135 178 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 KYNUQ16719 465 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 ANKRD20A8PQ5CZ79 823 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 EFHC1Q5JVL4 640 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 CLLU1OSQ5K130 101 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 ZC3H18Q86VM9 953 aaKnown RBP17.06■□□□□ 0.32
CAPN13-203ENST00000458085 ZNF280BQ86YH2 543 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 TAB3Q8N5C8 712 aaPredicted RBP17.06■□□□□ 0.32
CAPN13-203ENST00000458085 PLD5Q8N7P1 536 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 SLAIN1Q8ND83 568 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 MYCBPAPQ8TBZ2 947 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 PCDH9Q9HC56 1237 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 TMLHEQ9NVH6 421 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 MTMR10Q9NXD2 777 aa17.06■□□□□ 0.32
CAPN13-203ENST00000458085 MYCP01106 439 aaPredicted RBP17.05■□□□□ 0.32
CAPN13-203ENST00000458085 GNRH1P01148 92 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 ODC1P11926 461 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 NR1D1P20393 614 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 L1CAMP32004 1257 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 EIF3BP55884 814 aaKnown RBP17.05■□□□□ 0.32
CAPN13-203ENST00000458085 PDK2Q15119 407 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 DCAF6Q58WW2 860 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 ERMARDQ5T6L9 678 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 SYPL2Q5VXT5 272 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 EPS8L3Q8TE67 593 aaKnown RBP17.05■□□□□ 0.32
CAPN13-203ENST00000458085 LRRN4Q8WUT4 740 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 ULBP1Q9BZM6 244 aa17.05■□□□□ 0.32
CAPN13-203ENST00000458085 TMPRSS4Q9NRS4 437 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms