RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 TRIM49CP0CI26 452 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 VAMP7P51809 220 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 NDST1P52848 882 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 SLC5A3P53794 718 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 SEC13P55735 322 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 DPYDQ12882 1025 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 UAP1L1Q3KQV9 507 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 SV2AQ7L0J3 742 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 CCDC150Q8NCX0 1101 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 CCDC26Q8TAB7 109 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 ZCCHC14Q8WYQ9 949 aaKnown RBP16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 TAF4BQ92750 862 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 RNF38Q9H0F5 515 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 GDPD2Q9HCC8 539 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 FAM49BQ9NUQ9 324 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 TRAF3IP3Q9Y228 551 aa16.69■□□□□ 0.26
CHCHD3-204ENST00000457942 A0A1W2PQ27 194 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 A0A1W2PQ64 194 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 A0A1W2PQD8 194 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 IKBKBO14920 756 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 AKAP3O75969 853 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 CYP17A1P05093 508 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 RPL13P26373 211 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 ADORA2BP29275 332 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 GCLMP48507 274 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 ZXDBP98169 803 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 HECTD3Q5T447 861 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 DAB2IPQ5VWQ8 1189 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 INTS8Q75QN2 995 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 FAM186BQ8IYM0 893 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 SCAMP5Q8TAC9 235 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 SLC2A14Q8TDB8 520 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 TMEM174Q8WUU8 243 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 OVCA2Q8WZ82 227 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 JAKMIP2Q96AA8 810 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 ZC3H10Q96K80 434 aaKnown RBP16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 SCNM1Q9BWG6 230 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 TMEM121BQ9BXQ6 578 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 GOLPH3LQ9H4A5 285 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 HMGXB4Q9UGU5 601 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 CHORDC1Q9UHD1 332 aaPredicted RBP16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 SH3BP1Q9Y3L3 701 aa16.68■□□□□ 0.26
CHCHD3-204ENST00000457942 CCDC163A0A0D9SF12 145 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 FAM237AA0A1B0GTK4 181 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 SRRM3A6NNA2 597 aaPredicted RBP16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 ZNF202O95125 648 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 OLFM2O95897 454 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 ADH1CP00326 375 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 ASS1P00966 412 aaKnown RBP16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 FAM200BP0CF97 657 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 PSMC2P35998 433 aaKnown RBP16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 ASPAP45381 313 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 DGKEP52429 567 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 MAP3K7CLP57077 242 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 DMC1Q14565 340 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 TTC30AQ86WT1 665 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 FUKQ8N0W3 1084 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 CAMKK1Q8N5S9 505 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 KDF1Q8NAX2 398 aaPredicted RBP16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 DEFB124Q8NES8 71 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 DNAI2Q9GZS0 605 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 GMIPQ9P107 970 aa16.67■□□□□ 0.26
CHCHD3-204ENST00000457942 MYOFQ9NZM1 2061 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 BCLAF3A2AJT9 711 aaKnown RBP16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 GOLGA6L4A6NEF3 574 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 MAPK13O15264 365 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 COCHO43405 550 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 RHOBTB1O94844 696 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 APBB3O95704 486 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 IRF1P10914 325 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 CD58P19256 250 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 ADAM9Q13443 819 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 DHCR24Q15392 516 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 C2orf27AQ580R0 203 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 PAQR9Q6ZVX9 377 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 SYT13Q7L8C5 426 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 UNC93AQ86WB7 457 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 GUF1Q8N442 669 aaKnown RBP16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 C12orf29Q8N999 325 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 TSTD1Q8NFU3 115 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 EZH1Q92800 747 aaPredicted RBP16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 GATA6Q92908 595 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 CCSER2Q9H7U1 834 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 TMEM9BQ9NQ34 198 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 TBC1D14Q9P2M4 693 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 CIZ1Q9ULV3 898 aaPredicted RBP16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 LHX6Q9UPM6 363 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 WASF3Q9UPY6 502 aa16.66■□□□□ 0.26
CHCHD3-204ENST00000457942 HYAL3O43820 417 aaPredicted RBP16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 ADH5P11766 374 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 BCKDHBP21953 392 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 OPRD1P41143 372 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 KDSRQ06136 332 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 RING1Q06587 406 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 BECN1Q14457 450 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 NFIL3Q16649 462 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 C1orf220Q5T0J3 134 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 CYP2U1Q7Z449 544 aa16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 SMYD4Q8IYR2 804 aaPredicted RBP16.65■□□□□ 0.26
CHCHD3-204ENST00000457942 TAS1R2Q8TE23 839 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms