RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 CEP41Q9BYV8 373 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 DDX43Q9NXZ2 648 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 DCDC2Q9UHG0 476 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 VPS9D1Q9Y2B5 631 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 PDE4DIPQ5VU43 2346 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 MST1RQ04912 1400 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 PJA2O43164 708 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 FBXO21O94952 628 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 POMCP01189 267 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 DDX5P17844 614 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 HLA-DPA1P20036 260 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 ALDH5A1P51649 535 aaPredicted RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 SLC12A3P55017 1021 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 HDAC4P56524 1084 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 STX5Q13190 355 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 PATL1Q86TB9 770 aaKnown RBP12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 SCUBE3Q8IX30 993 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 KAT5Q92993 513 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 ASB7Q9H672 318 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 CCDC134Q9H6E4 229 aa12.12□□□□□ -0.47
SMARCAD1-204ENST00000457823 ANKRD63C9JTQ0 380 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 PDHXO00330 501 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 CYP2F1P24903 491 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 FBXW4P57775 412 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 COLGALT1Q8NBJ5 622 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 CYGBQ8WWM9 190 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 THAP11Q96EK4 314 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ASCC2Q9H1I8 757 aaPredicted RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ACOT9Q9Y305 439 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 PPP2R3BQ9Y5P8 575 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 TRPC5OSA6NMA1 111 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ZBTB22O15209 634 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 CASP5P51878 434 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 UNC45BQ8IWX7 931 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 TBC1D19Q8N5T2 526 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 CELF6Q96J87 481 aaKnown RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 SYT15Q9BQS2 421 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 PCDH9Q9HC56 1237 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 RBM22Q9NW64 420 aaKnown RBP eCLIP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 FAM198AQ9UFP1 575 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 PNMA8BQ9ULN7 279 aaPredicted RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 CLCA2Q9UQC9 943 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 FAM95CA0A1B0GW59 222 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 EVPLLA8MZ36 301 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 GJB6O95452 261 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 BMP6P22004 513 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ATN1P54259 1190 aaPredicted RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 MPP3Q13368 585 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ZNF268Q14587 947 aaPredicted RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 TTLL9Q3SXZ7 439 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 WDR59Q6PJI9 974 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ANKS3Q6ZW76 656 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 C1orf186Q6ZWK4 172 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ZNF467Q7Z7K2 595 aaPredicted RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 NT5DC3Q86UY8 548 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 BRSK2Q8IWQ3 736 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 VPS37AQ8NEZ2 397 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 MRPS31Q92665 395 aaKnown RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 HAS1Q92839 578 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 WWOXQ9NZC7 414 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 TRPM5Q9NZQ8 1165 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 SPASTQ9UBP0 616 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 ITGA11Q9UKX5 1188 aa12.11□□□□□ -0.47
SMARCAD1-204ENST00000457823 STRNO43815 780 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 CDH2P19022 906 aaPredicted RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 YWHAZP63104 245 aaKnown RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 PPP3CAQ08209 521 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 EFL1Q7Z2Z2 1120 aaKnown RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 MAP4K3Q8IVH8 894 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 CAVIN3Q969G5 261 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 VCPIP1Q96JH7 1222 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 ECSITQ9BQ95 431 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 THUMPD3Q9BV44 507 aaKnown RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 DCLK3Q9C098 648 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 ABHD16BQ9H3Z7 469 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 ACP6Q9NPH0 428 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 SLC24A2Q9UI40 661 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 KCNK1O00180 336 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 FAM153BP0C7A2 387 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 MBL2P11226 248 aaPredicted RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 KCNA3P22001 575 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 ELK3P41970 407 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 AQP5P55064 265 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 BTKQ06187 659 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 TMEM132BQ14DG7 1078 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 MEA1Q16626 185 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 FAM153CQ494X1 144 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 GLIS2Q9BZE0 524 aaPredicted RBP12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 NT5MQ9NPB1 228 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
SMARCAD1-204ENST00000457823 FAM153AQ9UHL3 310 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms