RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 RPL26P61254 145 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 YWHAZP63104 245 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ROR2Q01974 943 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 OGDHQ02218 1023 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PTPN11Q06124 597 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF252P-AS1Q0IIN9 211 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 FAAP100Q0VG06 881 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 WASHC5Q12768 1159 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GRIK3Q13003 919 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CBLBQ13191 982 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 STX3Q13277 289 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 THOC5Q13769 683 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 HIC1Q14526 733 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 KCNJ11Q14654 390 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 EFTUD2Q15029 972 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TPSAB1Q15661 275 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CHI3L2Q15782 390 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TAZQ16635 292 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 WDR72Q3MJ13 1102 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 KBTBD12Q3ZCT8 623 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PTPN20Q4JDL3 420 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 FSCBQ5H9T9 825 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CFAP157Q5JU67 520 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 FNBP1LQ5T0N5 605 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TMEM63BQ5T3F8 832 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 STXBP5Q5T5C0 1151 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ATF7IP2Q5U623 682 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 C1orf146Q5VVC0 180 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ANKRD22Q5VYY1 191 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CDCA2Q69YH5 1023 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 DENND1BQ6P3S1 775 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 AAGABQ6PD74 315 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 C1orf228Q6PIY5 440 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 POTEAQ6S8J7 498 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 METTL7BQ6UX53 244 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 KYAT3Q6YP21 454 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CATSPERGQ6ZRH7 1159 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TSHZ1Q6ZSZ6 1077 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PDZD4Q76G19 769 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 XYLT1Q86Y38 959 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 NT5DC4Q86YG4 428 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZDHHC17Q8IUH5 632 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 UNC45BQ8IWX7 931 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 HACE1Q8IYU2 909 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 KIRREL3Q8IZU9 778 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 NME8Q8N427 588 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GLIS1Q8NBF1 620 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC4A11Q8NBS3 891 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 RNF149Q8NC42 400 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 RFWD2Q8NHY2 731 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TTC8Q8TAM2 541 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GSDMBQ8TAX9 411 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ACMSDQ8TDX5 336 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MZB1Q8WU39 189 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 AFG1LQ8WV93 481 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SCG3Q8WXD2 468 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SPOCK2Q92563 424 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 USP6NLQ92738 828 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 UTP4Q969X6 686 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ELMO3Q96BJ8 720 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ACSF2Q96CM8 615 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 RTP4Q96DX8 246 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CMTM5Q96DZ9 223 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 DTNBP1Q96EV8 351 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PTCD3Q96EY7 689 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TMEM176AQ96HP8 235 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZBED3Q96IU2 234 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZBTB45Q96K62 511 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 FGD4Q96M96 766 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 HEXIM2Q96MH2 286 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 WRNIP1Q96S55 665 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 KLF6Q99612 283 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF184Q99676 751 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ACO2Q99798 780 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZNF670Q9BS34 389 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 NAT9Q9BTE0 207 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 INO80BQ9C086 356 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SDCBP2Q9H190 292 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 C1orf21Q9H246 121 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 RAB6BQ9NRW1 208 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PCMTD2Q9NV79 361 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ETNK2Q9NVF9 386 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ARL8BQ9NVJ2 186 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PRMT7Q9NVM4 692 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 THAP1Q9NVV9 213 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 NMRK1Q9NWW6 199 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 DLGAP2Q9P1A6 1054 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SLC17A7Q9P2U7 560 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 HESX1Q9UBX0 185 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 NKX1-2Q9UD57 310 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PCSK1NQ9UHG2 260 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 CPSF3Q9UKF6 684 aaKnown RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ITGA11Q9UKX5 1188 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 GRID1Q9ULK0 1009 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 USP18Q9UMW8 372 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 SSX2IPQ9Y2D8 614 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 ZBTB12Q9Y330 459 aaPredicted RBP3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 PLLPQ9Y342 182 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 TTLL3Q9Y4R7 772 aa3.46□□□□□ -1.86
HMGN1P18-201ENST00000457642 MAD1L1Q9Y6D9 718 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms