RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 UBL4AP11441 157 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 UQCRBP14927 111 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 ANPEPP15144 967 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 ZNF12P17014 697 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 ATP5DP30049 168 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 SLC5A2P31639 672 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 PPARGP37231 505 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-218ENST00000456174 NAMPTP43490 491 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 RAP1GDS1P52306 607 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 CHN2P52757 468 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 RNASE9P60153 205 aaKnown RBP7.95□□□□□ -1.14
HDAC9-218ENST00000456174 KLHL30Q0D2K2 578 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 STRN3Q13033 797 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 LRP8Q14114 963 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 SLC29A2Q14542 456 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 SEPT7Q16181 437 aaKnown RBP7.95□□□□□ -1.14
HDAC9-218ENST00000456174 SNRNP35Q16560 246 aaKnown RBP7.95□□□□□ -1.14
HDAC9-218ENST00000456174 FAM110CQ1W6H9 321 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 FYB2Q5VWT5 728 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 TAPT1Q6NXT6 567 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 ZNF449Q6P9G9 518 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 GJB7Q6PEY0 223 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 UGT2A3Q6UWM9 527 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 RGS9BPQ6ZS82 235 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 DPP9Q86TI2 863 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 CBWD2Q8IUF1 395 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 DDHD1Q8NEL9 900 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 DTX3LQ8TDB6 740 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 C10orf82Q8WW14 230 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 GIMAP1Q8WWP7 306 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 ARHGEF2Q92974 986 aaKnown RBP7.95□□□□□ -1.14
HDAC9-218ENST00000456174 CENPOQ9BU64 300 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 INTS2Q9H0H0 1204 aaKnown RBP7.95□□□□□ -1.14
HDAC9-218ENST00000456174 VTA1Q9NP79 307 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 UVRAGQ9P2Y5 699 aa7.95□□□□□ -1.14
HDAC9-218ENST00000456174 AJAP1Q9UKB5 411 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-218ENST00000456174 LOC105371267A0A1B0GV96 52 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 FAM187AA6NFU0 413 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 TMEM114B3SHH9 223 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 KCNK3O14649 394 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 CNOT3O75175 753 aaKnown RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 RARGP13631 454 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PCSK6P29122 969 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 GCLMP48507 274 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 LIG4P49917 911 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ZNF157P51786 506 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 JAM2P57087 298 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 GFPT1Q06210 699 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ARHGAP1Q07960 439 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PPP3CAQ08209 521 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 CETN1Q12798 172 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 EIF2B5Q13144 721 aaKnown RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 MED21Q13503 144 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 GRB14Q14449 540 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PPP2R5EQ16537 467 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ANKDD1AQ495B1 522 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 C1orf220Q5T0J3 134 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ZDHHC24Q6UX98 284 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 NLRP9Q7RTR0 991 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 IRF2BP2Q7Z5L9 587 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PLEKHH3Q7Z736 793 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ERI1Q8IV48 349 aaKnown RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ALLCQ8N6M5 410 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 SPERTQ8NA61 448 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 MGARPQ8TDB4 240 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PTCD2Q8WV60 388 aaKnown RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 CCDC127Q96BQ5 260 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PITPNM3Q9BZ71 974 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 SMARCAD1Q9H4L7 1026 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 GPAMQ9HCL2 828 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 AMACRQ9UHK6 382 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 SLC30A1Q9Y6M5 507 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 DOCK3Q8IZD9 2030 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ZBTB42B2RXF5 422 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 K7ERI5 159 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 KRIT1O00522 736 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 HGSO14964 777 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 KMOO15229 486 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PHF2O75151 1096 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 BAIAP3O94812 1187 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 GARTP22102 1010 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 MAPK4P31152 587 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 PHBP35232 272 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 ACADSBP45954 432 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 SLC26A2P50443 739 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 LAMC2Q13753 1193 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 NR1D2Q14995 579 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 SUZ12Q15022 739 aaKnown RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 NADK2Q4G0N4 442 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 SPOPLQ6IQ16 392 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 CCSAPQ6IQ19 270 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 NIPAL1Q6NVV3 410 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 MAMDC4Q6UXC1 1216 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 VASH1Q7L8A9 365 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-218ENST00000456174 RASAL3Q86YV0 1011 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 LSMEM2Q8N112 164 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 GPD1LQ8N335 351 aa7.94□□□□□ -1.14
HDAC9-218ENST00000456174 TMCO5AQ8N6Q1 288 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms