RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CDKAL1Q5VV42 579 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 TRIM68Q6AZZ1 485 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 CC2D1AQ6P1N0 951 aaPredicted RBP18.28■□□□□ 0.52
USP39-208ENST00000455732 LCLAT1Q6UWP7 414 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 MAMSTRQ6ZN01 415 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 CCDC186Q7Z3E2 898 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 RBBP8NLQ8NC74 664 aaPredicted RBP18.28■□□□□ 0.52
USP39-208ENST00000455732 OSCP1Q8WVF1 389 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 CHFRQ96EP1 664 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 CRACR2AQ9BSW2 395 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 RNF38Q9H0F5 515 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 NDST4Q9H3R1 872 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 EBF3Q9H4W6 596 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 LMAN1LQ9HAT1 526 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 UBE2TQ9NPD8 197 aaPredicted RBP18.28■□□□□ 0.52
USP39-208ENST00000455732 TLR8Q9NR97 1041 aaKnown RBP18.28■□□□□ 0.52
USP39-208ENST00000455732 SAMSN1Q9NSI8 373 aaKnown RBP18.28■□□□□ 0.52
USP39-208ENST00000455732 HESX1Q9UBX0 185 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 CHORDC1Q9UHD1 332 aaPredicted RBP18.28■□□□□ 0.52
USP39-208ENST00000455732 FBXO4Q9UKT5 387 aa18.28■□□□□ 0.52
USP39-208ENST00000455732 XPO1O14980 1071 aaKnown RBP18.27■□□□□ 0.52
USP39-208ENST00000455732 CYP26A1O43174 497 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 COCHO43405 550 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 LAMTOR5O43504 91 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 ABL1P00519 1130 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 SETSIPP0DME0 302 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 PON1P27169 355 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 BST2Q10589 180 aaKnown RBP18.27■□□□□ 0.52
USP39-208ENST00000455732 MTAPQ13126 283 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 PKDCCQ504Y2 493 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 C11orf57Q6ZUT1 292 aaPredicted RBP18.27■□□□□ 0.52
USP39-208ENST00000455732 ASCL5Q7RTU5 278 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 PIGZQ86VD9 579 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 DDX42Q86XP3 938 aaKnown RBP eCLIP18.27■□□□□ 0.52
USP39-208ENST00000455732 NKD2Q969F2 451 aaPredicted RBP18.27■□□□□ 0.52
USP39-208ENST00000455732 CYLDQ9NQC7 956 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 CPQQ9Y646 472 aa18.27■□□□□ 0.52
USP39-208ENST00000455732 ZNF292O60281 2723 aa18.27■□□□□ 0.51
USP39-208ENST00000455732 EP300Q09472 2414 aaPredicted RBP18.27■□□□□ 0.51
USP39-208ENST00000455732 RNF225M0QZC1 329 aaPredicted RBP18.26■□□□□ 0.51
USP39-208ENST00000455732 LEFTY2O00292 366 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 ARSAP15289 507 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 SLC9A1P19634 815 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 PLA2G4AP47712 749 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 PGFP49763 221 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 PSEN1P49768 467 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 MFAP3P55082 362 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 GAS6Q14393 721 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 CNGA2Q16280 664 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 ZNF528Q3MIS6 628 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 TFAP2BQ92481 460 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 ZFRQ96KR1 1074 aaKnown RBP18.26■□□□□ 0.51
USP39-208ENST00000455732 IER2Q9BTL4 223 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 CCSER2Q9H7U1 834 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 PRMT8Q9NR22 394 aaPredicted RBP18.26■□□□□ 0.51
USP39-208ENST00000455732 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.26■□□□□ 0.51
USP39-208ENST00000455732 FRYLO94915 3013 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 KIAA1549LQ6ZVL6 1849 aa18.26■□□□□ 0.51
USP39-208ENST00000455732 GVINP1Q7Z2Y8 2422 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 OTOGLQ3ZCN5 2332 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 TLR5O60602 858 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 MBL2P11226 248 aaPredicted RBP18.25■□□□□ 0.51
USP39-208ENST00000455732 MYL5Q02045 173 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 PDE4CQ08493 712 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 CCINQ13939 588 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 PON2Q15165 354 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 MEA1Q16626 185 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 EML3Q32P44 896 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 HSP90AA4PQ58FG1 418 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 KLHDC10Q6PID8 442 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 ZNF276Q8N554 614 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 KCTD13Q8WZ19 329 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 NELL1Q92832 810 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 ZSWIM1Q9BR11 485 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 SIX2Q9NPC8 291 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 RBM12Q9NTZ6 932 aaKnown RBP18.25■□□□□ 0.51
USP39-208ENST00000455732 DUS2Q9NX74 493 aaKnown RBP18.25■□□□□ 0.51
USP39-208ENST00000455732 CLIC5Q9NZA1 410 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 R4GN57 208 aa18.25■□□□□ 0.51
USP39-208ENST00000455732 KRT5P13647 590 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 BRD2P25440 801 aaKnown RBP18.24■□□□□ 0.51
USP39-208ENST00000455732 IFNAR2P48551 515 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 TYRO3Q06418 890 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 LRRC32Q14392 662 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 KLHL40Q2TBA0 621 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 DGKKQ5KSL6 1271 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 PM20D1Q6GTS8 502 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 DPY19L2P1Q6NXN4 242 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 GJB7Q6PEY0 223 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 ARHGAP18Q8N392 663 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 CPA6Q8N4T0 437 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 SHC3Q92529 594 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 ATP2A3Q93084 1043 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 ECT2Q9H8V3 914 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 NMUR1Q9HB89 426 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.24■□□□□ 0.51
USP39-208ENST00000455732 OSER1Q9NX31 292 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 SMPD4Q9NXE4 827 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 WNT6Q9Y6F9 365 aa18.24■□□□□ 0.51
USP39-208ENST00000455732 A0A1W2PQH9 124 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms