RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SOX10P56693 466 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 KRT76Q01546 638 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 FOLH1Q04609 750 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 GRAMD1BQ3KR37 738 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 DARS2Q6PI48 645 aaKnown RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 UGT2A3Q6UWM9 527 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 ANO5Q75V66 913 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 RBM12BQ8IXT5 1001 aaKnown RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 APOL6Q9BWW8 343 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 FRMD8Q9BZ67 464 aaPredicted RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 HOMER2Q9NSB8 354 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 COL20A1Q9P218 1284 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 ITGA11Q9UKX5 1188 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 C15orf38-AP3S2A0A0A6YYH1 394 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 CCDC160A6NGH7 325 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 CHADO15335 359 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 STRNO43815 780 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 RFPL1O75677 317 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 PGM3O95394 542 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 NLRP11P59045 1033 aaKnown RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 ROR1Q01973 937 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 SLC25A11Q02978 314 aaKnown RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 DEUP1Q05D60 604 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 TTLL12Q14166 644 aaPredicted RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 RALGPS1Q5JS13 557 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 CES4AQ5XG92 561 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 KLC3Q6P597 504 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 RNF111Q6ZNA4 994 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 PODNQ7Z5L7 613 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 ARPINQ7Z6K5 226 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 NDUFAF2Q8N183 169 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 SPATA18Q8TC71 538 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 ACTRT2Q8TDY3 377 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 RBAKQ9NYW8 714 aaPredicted RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 ZC3H7BQ9UGR2 993 aaKnown RBP14.24□□□□□ -0.13
PTPRE-204ENST00000455661 FEM1BQ9UK73 627 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 TTLL3Q9Y4R7 772 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 LRRC37AA6NMS7 1700 aa14.24□□□□□ -0.13
PTPRE-204ENST00000455661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 TOM1L1O75674 476 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CLPTM1O96005 669 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CCDC166P0CW27 439 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 GYS1P13807 737 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 RAG1P15918 1043 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CRHR1P34998 444 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 MRPS9P82933 396 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 NCOA4Q13772 614 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 KCNJ11Q14654 390 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 TAZQ16635 292 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CYP4A22Q5TCH4 519 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 PGM2L1Q6PCE3 622 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 RBM44Q6ZP01 1051 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CCDC33Q8N5R6 958 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 HIPK4Q8NE63 616 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 MCPH1Q8NEM0 835 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 PIWIL2Q8TC59 973 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CMTM5Q96DZ9 223 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 AGBL1Q96MI9 1066 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 PRICKLE1Q96MT3 831 aaPredicted RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 FAM96AQ9H5X1 160 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 SUDS3Q9H7L9 328 aaPredicted RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CDH22Q9UJ99 828 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 DTNAQ9Y4J8 743 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 PTPRJQ12913 1337 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 BTAF1O14981 1849 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 BTBD19C9JJ37 291 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CASQ2O14958 399 aaPredicted RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 AVILO75366 819 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 LRCH4O75427 683 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 PDE5AO76074 875 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 PROCP04070 461 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 SETSIPP0DME0 302 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 KRT3P12035 628 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 POLR2BP30876 1174 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 ZNF132P52740 706 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 INHBCP55103 352 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 WNT7BP56706 349 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 ZYXQ15942 572 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 DBN1Q16643 649 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 RABGAP1LQ5R372 815 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 GPAT2Q6NUI2 795 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 RTKN2Q8IZC4 609 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 POU5F2Q8N7G0 328 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 CCDC124Q96CT7 223 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 C20orf27Q9GZN8 174 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 DBNDD1Q9H9R9 158 aa14.23□□□□□ -0.13
PTPRE-204ENST00000455661 HERC5Q9UII4 1024 aaKnown RBP14.23□□□□□ -0.13
PTPRE-204ENST00000455661 RGPD3A6NKT7 1758 aaPredicted RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 RGPD4Q7Z3J3 1758 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 CXorf49A8MYA2 514 aaPredicted RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 LDHAP00338 332 aaKnown RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 DESP17661 470 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 OSBPP22059 807 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 EIF4BP23588 611 aaKnown RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 PRKCHP24723 683 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 IL1R2P27930 398 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 RFC1P35251 1148 aaPredicted RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 HIRAP54198 1017 aaPredicted RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 BMPR2Q13873 1038 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms