RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 CPA2P48052 419 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 MAP3K7CLP57077 242 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 GBE1Q04446 702 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 FAAP100Q0VG06 881 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 SLC1A5Q15758 541 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 PID1Q7Z2X4 250 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 VPS52Q8N1B4 723 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 ZMAT2Q96NC0 199 aaKnown RBP12.46□□□□□ -0.41
SMPD4-213ENST00000454468 PCMTD2Q9NV79 361 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 NUDT5Q9UKK9 219 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
SMPD4-213ENST00000454468 CASTOR2A6NHX0 329 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 CLDN10P78369 228 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 ADIGQ0VDE8 80 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 CCDC6Q16204 474 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 FBXO47Q5MNV8 452 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 PCGF5Q86SE9 256 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 KIRREL3Q8IZU9 778 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 SLC7A14Q8TBB6 771 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 PEBP4Q96S96 227 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 CYTH2Q99418 400 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 FERMT1Q9BQL6 677 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 SLC5A4Q9NY91 659 aa12.46□□□□□ -0.42
SMPD4-213ENST00000454468 ATP8B3O60423 1300 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 C2orf71A6NGG8 1288 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 M0QYT0 321 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 ATP9BO43861 1147 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 CYP2F1P24903 491 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 FOXN2P32314 431 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 ARPP19P56211 112 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 TMPRSS15P98073 1019 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 CCL14Q16627 93 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 EGFL6Q8IUX8 553 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 ARFGAP1Q8N6T3 406 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 RMDN2Q96LZ7 410 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 SMYD2Q9NRG4 433 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 SLC17A7Q9P2U7 560 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 AP4E1Q9UPM8 1137 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 CITO14578 2027 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 MOCS2O96007 188 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-213ENST00000454468 PAEPP09466 180 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 KLRC2P26717 231 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 ZNF157P51786 506 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-213ENST00000454468 SNX16P57768 344 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 BBS12Q6ZW61 710 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 TLK2Q86UE8 772 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 ARMC2Q8NEN0 867 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 LGMNQ99538 433 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 GBA2Q9HCG7 927 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-213ENST00000454468 DONSONQ9NYP3 566 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 KLHL8Q9P2G9 620 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-213ENST00000454468 MCM3APO60318 1980 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 APOC4-APOC2K7ER74 178 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 APOC2P02655 101 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 SMIM10L2AP0DMW4 78 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 SMIM10L2BP0DMW5 78 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 GTF2A2P52657 109 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 ZNF143P52747 638 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-213ENST00000454468 RNASEH2BQ5TBB1 312 aaKnown RBP12.45□□□□□ -0.42
SMPD4-213ENST00000454468 CDCA2Q69YH5 1023 aaPredicted RBP12.45□□□□□ -0.42
SMPD4-213ENST00000454468 TRIM68Q6AZZ1 485 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 SLC27A1Q6PCB7 646 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 HACE1Q8IYU2 909 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 PAF1Q8N7H5 531 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 RNF217Q8TC41 542 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 BRI3BPQ8WY22 251 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 PGBD4Q96DM1 585 aa12.45□□□□□ -0.42
SMPD4-213ENST00000454468 IQANK1A0A1B0GTG1 560 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 TNPO2O14787 897 aaKnown RBP12.44□□□□□ -0.42
SMPD4-213ENST00000454468 CBX6O95503 412 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 NDUFV1P49821 464 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 ZNF132P52740 706 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 KCNT2Q6UVM3 1135 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 TTC30AQ86WT1 665 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 LRRC6Q86X45 466 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 DEFB106AQ8N104 65 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 CKAP2Q8WWK9 683 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 PPP1R36Q96LQ0 422 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 FGD4Q96M96 766 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 ZNF317Q96PQ6 595 aaPredicted RBP12.44□□□□□ -0.42
SMPD4-213ENST00000454468 ABHD16BQ9H3Z7 469 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 ITGA11Q9UKX5 1188 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 MFHAS1Q9Y4C4 1052 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 A8MUI8 341 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 KPNA7A9QM74 516 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 PGK1P00558 417 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 GOT1P17174 413 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 WDR4P57081 412 aaKnown RBP12.44□□□□□ -0.42
SMPD4-213ENST00000454468 COPS2P61201 443 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 KLHL38Q2WGJ6 581 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 RHBDF2Q6PJF5 856 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 PGLYRP2Q96PD5 576 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 DNAI2Q9GZS0 605 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 RRAGCQ9HB90 399 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 GOLGA8TH3BQL2 631 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 CYB561D2O14569 222 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 LGR5O75473 907 aa12.44□□□□□ -0.42
SMPD4-213ENST00000454468 STK10O94804 968 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms