RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PCDHB12Q9Y5F1 795 aa16.62■□□□□ 0.25
SNX17-204ENST00000453453 SART1O43290 800 aaKnown RBP16.61■□□□□ 0.25
SNX17-204ENST00000453453 ATP2C2O75185 946 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 NUDT17P0C025 328 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 MMP8P22894 467 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 HPDP32754 393 aaPredicted RBP16.61■□□□□ 0.25
SNX17-204ENST00000453453 USP41Q3LFD5 358 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 CTXN3Q4LDR2 81 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 CCT6BQ92526 530 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 NAP1L3Q99457 506 aaPredicted RBP16.61■□□□□ 0.25
SNX17-204ENST00000453453 RAD9AQ99638 391 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 RTP3Q9BQQ7 232 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 TTPALQ9BTX7 342 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 TXLNGYQ9BZA5 131 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 CCDC134Q9H6E4 229 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 CRTAC1Q9NQ79 661 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 AVENQ9NQS1 362 aaPredicted RBP16.61■□□□□ 0.25
SNX17-204ENST00000453453 STK39Q9UEW8 545 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 SCINQ9Y6U3 715 aa16.61■□□□□ 0.25
SNX17-204ENST00000453453 FAM187AA6NFU0 413 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 OR6C75A6NL08 312 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 CLGNO14967 610 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 TLL1O43897 1013 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 CYP1A2P05177 515 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 FAM200BP0CF97 657 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 GPD2P43304 727 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 PLCB3Q01970 1234 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 BYSLQ13895 437 aaKnown RBP16.6■□□□□ 0.25
SNX17-204ENST00000453453 ERMARDQ5T6L9 678 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 C4orf50Q6ZRC1 276 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 ANKS3Q6ZW76 656 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 SLC39A11Q8N1S5 342 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 ANKS4BQ8N8V4 417 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 TPCN2Q8NHX9 752 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 CHMP6Q96FZ7 201 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 PGM2Q96G03 612 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 LPIN3Q9BQK8 851 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 UVRAGQ9P2Y5 699 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 SUFUQ9UMX1 484 aa16.6■□□□□ 0.25
SNX17-204ENST00000453453 MYBPHLA2RUH7 354 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 CEP104O60308 925 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 PKDCCQ504Y2 493 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 KIAA0319Q5VV43 1072 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 TTC30AQ86WT1 665 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 TMEM173Q86WV6 379 aaPredicted RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 WDTC1Q8N5D0 677 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 CCDC197Q8NCU1 140 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 OR10T2Q8NGX3 314 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 SLC35G2Q8TBE7 412 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 STK32AQ8WU08 396 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 BCL7CQ8WUZ0 217 aaPredicted RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 MYLPFQ96A32 169 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 ARHGEF26Q96DR7 871 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 SMARCD1Q96GM5 515 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 XPO6Q96QU8 1125 aaKnown RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 DUSP16Q9BY84 665 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 B3GNT5Q9BYG0 378 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 MRPL47Q9HD33 250 aaKnown RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.59■□□□□ 0.25
SNX17-204ENST00000453453 WDR35Q9P2L0 1181 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 TPX2Q9ULW0 747 aaKnown RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 UTP11Q9Y3A2 253 aaKnown RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 KRIT1O00522 736 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 NPR3P17342 541 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 DRG2P55039 364 aaKnown RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 KRT17Q04695 432 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 TCEAL1Q15170 157 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 NFE2Q16621 373 aaPredicted RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 ODF2Q5BJF6 829 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 FAM171BQ6P995 826 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 CPLX4Q7Z7G2 160 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 FAM35AQ86V20 835 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 SPATA2LQ8IUW3 424 aaPredicted RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 UBLCP1Q8WVY7 318 aaPredicted RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 PCED1BQ96HM7 432 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 TMEM109Q9BVC6 243 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 NUP85Q9BW27 656 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 ZCWPW1Q9H0M4 648 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 STMN4Q9H169 189 aaPredicted RBP16.59■□□□□ 0.25
SNX17-204ENST00000453453 CYLDQ9NQC7 956 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 BATF3Q9NR55 127 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 KRT82Q9NSB4 513 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 PARVAQ9NVD7 372 aa16.59■□□□□ 0.25
SNX17-204ENST00000453453 CCT8L1PA6NM43 557 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 XPO1O14980 1071 aaKnown RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 ATMINO43313 823 aaPredicted RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 AP1G2O75843 785 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 SOD2P04179 222 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 RRM1P23921 792 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 MAGEA10P43363 369 aaPredicted RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 ACADSBP45954 432 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 MRPL58Q14197 206 aaKnown RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 KRT71Q3SY84 523 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 PTPN20Q4JDL3 420 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 RASIP1Q5U651 963 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 DNAJC24Q6P3W2 148 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 TLDC1Q6P9B6 456 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms