RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 PPP2R3CQ969Q6 453 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 CHMP4CQ96CF2 233 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 KAZALD1Q96I82 304 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 SUCLG2Q96I99 432 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 TMEM204Q9BSN7 226 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 ZNF518BQ9C0D4 1074 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 SEMA4BQ9NPR2 832 aaPredicted RBP2.83□□□□□ -1.96
LRCH3-209ENST00000452660 ZBTB40Q9NUA8 1239 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 TMEM184CQ9NVA4 438 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 SEMA5BQ9P283 1151 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 MGAT4CQ9UBM8 478 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.83□□□□□ -1.96
LRCH3-209ENST00000452660 CDY1Q9Y6F8 540 aa2.83□□□□□ -1.96
LRCH3-209ENST00000452660 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.83□□□□□ -1.96
LRCH3-209ENST00000452660 TRIP12Q14669 1992 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 IGLV5-39A0A0G2JS06 123 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 MBD3L4A6NDZ8 208 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 MBD3L3A6NE82 208 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 CD3EAPO15446 510 aaKnown RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 TLX3O43711 291 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 FGF2P09038 288 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 CREB1P16220 341 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 EN2P19622 333 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 UQCRC1P31930 480 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 CDKN2AP42771 156 aaKnown RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 MTHFSP49914 203 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 COPB1P53618 953 aaKnown RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 AMPD3Q01432 767 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 SEC23BQ15437 767 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 CATIPQ7Z7H3 387 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 CHPFQ8IZ52 775 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 PELI3Q8N2H9 469 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 SLC15A4Q8N697 577 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 C12orf76Q8N812 135 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 PNPLA1Q8N8W4 532 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 ZNF548Q8NEK5 533 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 MAFAQ8NHW3 353 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 WIPF2Q8TF74 440 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 IGFBPL1Q8WX77 278 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 EDC3Q96F86 508 aaKnown RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 FAM84BQ96KN1 310 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 PPP1R9BQ96SB3 815 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 CGRRF1Q99675 332 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 MS4A7Q9GZW8 240 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 FAM83DQ9H4H8 585 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 GBA2Q9HCG7 927 aaPredicted RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 A1CFQ9NQ94 594 aaKnown RBP2.82□□□□□ -1.96
LRCH3-209ENST00000452660 ANKRD6Q9Y2G4 727 aa2.82□□□□□ -1.96
LRCH3-209ENST00000452660 C4orf47A7E2U8 309 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 LACTBL1A8MY62 500 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 GTPBP1O00178 669 aaKnown RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 BTN3A1O00481 513 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 SPRY2O43597 315 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 MARCH6O60337 910 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 OFD1O75665 1012 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 ALDH2P05091 517 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 IL6STP40189 918 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 ALDH7A1P49419 539 aaKnown RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 ZXDBP98169 803 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 CTBP1Q13363 440 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 STIM1Q13586 685 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 CLCA4Q14CN2 919 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 EARS2Q5JPH6 523 aaKnown RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 MANEAQ5SRI9 462 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 DPY19L3Q6ZPD9 716 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 PLBD2Q8NHP8 589 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 JPH3Q8WXH2 748 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 HS6ST2Q96MM7 605 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 SLC12A5Q9H2X9 1139 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 MLXIPQ9HAP2 919 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 DNMT3BQ9UBC3 853 aaKnown RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 NKX1-2Q9UD57 310 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 PNMA8BQ9ULN7 279 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 FZD4Q9ULV1 537 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 ICKQ9UPZ9 632 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 TTBK1Q5TCY1 1321 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 ZNF335Q9H4Z2 1342 aaPredicted RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 TCF20Q9UGU0 1960 aaKnown RBP2.81□□□□□ -1.96
LRCH3-209ENST00000452660 EVPLQ92817 2033 aa2.81□□□□□ -1.96
LRCH3-209ENST00000452660 LOC102723971A0A1B0GUV8 181 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 CLIC1O00299 241 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 TBC1D4O60343 1298 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 VNN1O95497 513 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 TNFRSF1BP20333 461 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 ADRA1DP25100 572 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 KCNJ4P48050 445 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 AGFG1P52594 562 aaKnown RBP2.8□□□□□ -1.96
LRCH3-209ENST00000452660 SLC12A2P55011 1212 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 PFKFB3Q16875 520 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-209ENST00000452660 MZT2AQ6P582 158 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 ZNF549Q6P9A3 640 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 GSG1LQ6UXU4 331 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 ZBTB46Q86UZ6 589 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 COL23A1Q86Y22 540 aaPredicted RBP2.8□□□□□ -1.96
LRCH3-209ENST00000452660 B4GALNT2Q8NHY0 566 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 SPSB4Q96A44 273 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 ZDHHC12Q96GR4 267 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 NLRP4Q96MN2 994 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 CAMK1GQ96NX5 476 aa2.8□□□□□ -1.96
LRCH3-209ENST00000452660 PPP1R10Q96QC0 940 aaKnown RBP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms