RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 CIITAP33076 1130 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 TRHRP34981 398 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 PSMC2P35998 433 aaKnown RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CTSKP43235 329 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CARSP49589 748 aaKnown RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 HARS2P49590 506 aaKnown RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 NT5C2P49902 561 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 HNMTP50135 292 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 MLLT6P55198 1093 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 PSMC6P62333 389 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CHRNEQ04844 493 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SCAPQ12770 1279 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 RALGDSQ12967 914 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ADAM9Q13443 819 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 LASP1Q14847 261 aaKnown RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 RABL6Q3YEC7 729 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZBTB41Q5SVQ8 909 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF648Q5T619 568 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ERMARDQ5T6L9 678 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 TAF3Q5VWG9 929 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 OLFML2BQ68BL8 750 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 KRT80Q6KB66 452 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CRTC3Q6UUV7 619 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAM83HQ6ZRV2 1179 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 USP49Q70CQ1 688 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 LRRC8DQ7L1W4 858 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 UBE3BQ7Z3V4 1068 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 GLRX5Q86SX6 157 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ADCK1Q86TW2 530 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 NME9Q86XW9 330 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 PHYKPLQ8IUZ5 450 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZFPM1Q8IX07 1006 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 LILRA2Q8N149 483 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 AOPEPQ8N6M6 819 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ANKS4BQ8N8V4 417 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 LINC00116Q8NCU8 138 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 LINS1Q8NG48 757 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 OR1N1Q8NGS0 311 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 OR6B3Q8NGW1 331 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CEP76Q8TAP6 659 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 METTL6Q8TCB7 284 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 BRIX1Q8TDN6 353 aaKnown RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SCFD2Q8WU76 684 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 LINC01599Q8WXQ3 324 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 STAMQ92783 540 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 KCNN1Q92952 543 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 FAM162AQ96A26 154 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 C3orf49Q96BT1 292 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 MAML3Q96JK9 1138 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SNX27Q96L92 541 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 C16orf92Q96LL3 132 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 PRAM1Q96QH2 718 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 G6PC3Q9BUM1 346 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 TEX12Q9BXU0 123 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 TWSG1Q9GZX9 223 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 RNF32Q9H0A6 362 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SLC25A18Q9H1K4 315 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 MUC13Q9H3R2 512 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ARHGEF3Q9NR81 526 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SNX15Q9NRS6 342 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 TAS2R10Q9NYW0 307 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SELENONQ9NZV5 590 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 SUCLA2Q9P2R7 463 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 ZNF212Q9UDV6 495 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 EBF1Q9UH73 591 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 CORO1CQ9ULV4 474 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 AURKCQ9UQB9 309 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 DERAQ9Y315 318 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 JRKLQ9Y4A0 524 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 B3GALT1Q9Y5Z6 326 aa4.72□□□□□ -1.65
HMGB3P21-201ENST00000452483 GPR75-ASB3A0A0A6YYF3 556 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRAV34A0A0B4J273 112 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 A0A0G2JPF8 293 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CCDC151A5D8V7 595 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TRIM43BA6NCK2 446 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 HNRNPCL3B7ZW38 293 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 E7EVH7 732 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 M0QX08 132 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 RTN2O75298 545 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 FARP2O94887 1054 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CSPG5O95196 566 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 OLFM2O95897 454 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 IFNB1P01574 187 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 LRG1P02750 347 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 C8AP07357 584 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 HMOX1P09601 288 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TSPY4P0CV99 314 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TSPY10P0CW01 314 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 HNRNPCL4P0DMR1 293 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 MYBL1P10243 752 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 CPA1P15085 419 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 ARF4P18085 180 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 SAT1P21673 171 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 KCNA5P22460 613 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 TM4SF1P30408 202 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 MCM7P33993 719 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 BMP8BP34820 402 aa4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 PPARGP37231 505 aaPredicted RBP4.71□□□□□ -1.66
HMGB3P21-201ENST00000452483 ATP5OP48047 213 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms