RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 ATXN3LQ9H3M9 355 aa12.46□□□□□ -0.42
RCL1-208ENST00000448872 FBXO44Q9H4M3 255 aa12.46□□□□□ -0.42
RCL1-208ENST00000448872 CNGB3Q9NQW8 809 aa12.46□□□□□ -0.42
RCL1-208ENST00000448872 NUDT5Q9UKK9 219 aa12.46□□□□□ -0.42
RCL1-208ENST00000448872 C2orf78A6NCI8 922 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 ZNF840PA6NDX5 716 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 GOLGA8SH3BPF8 625 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 STK25O00506 426 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 RTN2O75298 545 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 GRAP2O75791 330 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 PTMAP06454 111 aaKnown RBP12.45□□□□□ -0.42
RCL1-208ENST00000448872 ZDHHC11BP0C7U3 371 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 CHRM1P11229 460 aaPredicted RBP12.45□□□□□ -0.42
RCL1-208ENST00000448872 GZMAP12544 262 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 ABCB4P21439 1286 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 RRM1P23921 792 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 MRPS5P82675 430 aaKnown RBP12.45□□□□□ -0.42
RCL1-208ENST00000448872 TEAD2Q15562 447 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 ATAT1Q5SQI0 421 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 TXNDC8Q6A555 127 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 CES5AQ6NT32 575 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 TMTC1Q8IUR5 882 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 ST13P5Q8NFI4 369 aaPredicted RBP12.45□□□□□ -0.42
RCL1-208ENST00000448872 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.45□□□□□ -0.42
RCL1-208ENST00000448872 SUSD6Q92537 303 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 EDEM1Q92611 657 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 KHSRPQ92945 711 aaKnown RBP eCLIP12.45□□□□□ -0.426e-9■■■■■ 30.6
RCL1-208ENST00000448872 ZSWIM3Q96MP5 696 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 PPP1R9BQ96SB3 815 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 ISCUQ9H1K1 167 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 POMKQ9H5K3 350 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 WDR6Q9NNW5 1121 aaKnown RBP12.45□□□□□ -0.42
RCL1-208ENST00000448872 COMMD8Q9NX08 183 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 TFR2Q9UP52 801 aa12.45□□□□□ -0.42
RCL1-208ENST00000448872 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
RCL1-208ENST00000448872 CLUHO75153 1309 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 MBTPS2O43462 519 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 TBX18O95935 607 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 FYNP06241 537 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 SP100P23497 879 aaPredicted RBP12.44□□□□□ -0.42
RCL1-208ENST00000448872 FSHRP23945 695 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 YWHAGP61981 247 aaKnown RBP eCLIP12.44□□□□□ -0.42
RCL1-208ENST00000448872 CCZ1BP86790 482 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 CCZ1P86791 482 aaPredicted RBP12.44□□□□□ -0.42
RCL1-208ENST00000448872 CCDC173Q0VFZ6 552 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 CBX2Q14781 532 aaPredicted RBP12.44□□□□□ -0.42
RCL1-208ENST00000448872 GET4Q7L5D6 327 aaPredicted RBP12.44□□□□□ -0.42
RCL1-208ENST00000448872 ACRBPQ8NEB7 543 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 ARHGEF26Q96DR7 871 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 SLITRK1Q96PX8 696 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 SLC22A12Q96S37 553 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 DESI2Q9BSY9 194 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 KCNF1Q9H3M0 494 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 CCSER2Q9H7U1 834 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 TRPC7Q9HCX4 862 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 TRPM5Q9NZQ8 1165 aa12.44□□□□□ -0.42
RCL1-208ENST00000448872 UXTQ9UBK9 157 aaPredicted RBP12.44□□□□□ -0.42
RCL1-208ENST00000448872 REXO2Q9Y3B8 237 aaKnown RBP12.44□□□□□ -0.42
RCL1-208ENST00000448872 TCRBV5S1A1TA0A578 114 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 MDM4O15151 490 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 FBXO21O94952 628 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 NDUFA10O95299 355 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 GALCP54803 685 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 RNASE9P60153 205 aaKnown RBP12.43□□□□□ -0.42
RCL1-208ENST00000448872 SLC6A3Q01959 620 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 SMAD4Q13485 552 aaKnown RBP12.43□□□□□ -0.42
RCL1-208ENST00000448872 LEXMQ3ZCV2 418 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 FAM102AQ5T9C2 384 aaPredicted RBP12.43□□□□□ -0.42
RCL1-208ENST00000448872 BSPRYQ5W0U4 402 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 TOGARAM2Q6ZUX3 1019 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 MON1AQ86VX9 555 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 CCDC170Q8IYT3 715 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 SCML4Q8N228 414 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 MAB21L3Q8N8X9 362 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 JOSD2Q8TAC2 188 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 FAM149B1Q96BN6 582 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 ZNF653Q96CK0 615 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 MCRS1Q96EZ8 462 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 RIPOR3Q96MK2 946 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 CYP2S1Q96SQ9 504 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 SLC46A2Q9BY10 475 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 SMG9Q9H0W8 520 aaKnown RBP12.43□□□□□ -0.42
RCL1-208ENST00000448872 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
RCL1-208ENST00000448872 MYO1AQ9UBC5 1043 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 NAALADL1Q9UQQ1 740 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 EPN1Q9Y6I3 576 aaPredicted RBP12.43□□□□□ -0.42
RCL1-208ENST00000448872 NCANO14594 1321 aa12.43□□□□□ -0.42
RCL1-208ENST00000448872 A0A0U1RQJ8 604 aa12.42□□□□□ -0.42
RCL1-208ENST00000448872 EIF3CLB5ME19 914 aaKnown RBP12.42□□□□□ -0.42
RCL1-208ENST00000448872 LCA5LO95447 670 aa12.42□□□□□ -0.42
RCL1-208ENST00000448872 LTFP02788 710 aa12.42□□□□□ -0.42
RCL1-208ENST00000448872 CALB1P05937 261 aa12.42□□□□□ -0.42
RCL1-208ENST00000448872 RARGP13631 454 aa12.42□□□□□ -0.42
RCL1-208ENST00000448872 CDC25CP30307 473 aa12.42□□□□□ -0.42
RCL1-208ENST00000448872 CYLC1P35663 651 aaPredicted RBP12.42□□□□□ -0.42
RCL1-208ENST00000448872 MTHFRP42898 656 aa12.42□□□□□ -0.42
RCL1-208ENST00000448872 PITX1P78337 314 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms