RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 KRT39Q6A163 491 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 CCNI2Q6ZMN8 369 aaPredicted RBP13.24□□□□□ -0.29
SSR4-205ENST00000447375 RBM43Q6ZSC3 357 aaKnown RBP13.24□□□□□ -0.29
SSR4-205ENST00000447375 SYT12Q8IV01 421 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 TAS1R2Q8TE23 839 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 C2orf15Q8WU43 125 aaKnown RBP13.24□□□□□ -0.29
SSR4-205ENST00000447375 EXOC4Q96A65 974 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 MED15Q96RN5 788 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 SMG9Q9H0W8 520 aaKnown RBP13.24□□□□□ -0.29
SSR4-205ENST00000447375 CRISPLD1Q9H336 500 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 TMEM74BQ9NUR3 256 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 NXF1Q9UBU9 619 aaKnown RBP13.24□□□□□ -0.29
SSR4-205ENST00000447375 MBD1Q9UIS9 605 aaPredicted RBP13.24□□□□□ -0.29
SSR4-205ENST00000447375 RWDD2AQ9UIY3 292 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 ASB3Q9Y575 518 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 ASCC3Q8N3C0 2202 aaKnown RBP13.24□□□□□ -0.29
SSR4-205ENST00000447375 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
SSR4-205ENST00000447375 ANAPC1Q9H1A4 1944 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 TNFRSF10BO14763 440 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 MBD3O95983 291 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 ACAT1P24752 427 aaKnown RBP13.23□□□□□ -0.29
SSR4-205ENST00000447375 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
SSR4-205ENST00000447375 STX17P56962 302 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 CYP4F8P98187 520 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
SSR4-205ENST00000447375 NFE2Q16621 373 aaPredicted RBP13.23□□□□□ -0.29
SSR4-205ENST00000447375 ZNF667Q5HYK9 610 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 INTS6LQ5JSJ4 861 aaKnown RBP13.23□□□□□ -0.29
SSR4-205ENST00000447375 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 SLC23A3Q6PIS1 610 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 RASSF3Q86WH2 238 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 ABCA7Q8IZY2 2146 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 SPPL2BQ8TCT7 592 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 PSMG2Q969U7 264 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 SLC35C1Q96A29 364 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 MRPL45Q9BRJ2 306 aaKnown RBP13.23□□□□□ -0.29
SSR4-205ENST00000447375 SRRTQ9BXP5 876 aaKnown RBP13.23□□□□□ -0.29
SSR4-205ENST00000447375 SLC46A2Q9BY10 475 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 SNX25Q9H3E2 840 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 TMLHEQ9NVH6 421 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 GTF3C4Q9UKN8 822 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 CDH9Q9ULB4 789 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 BPTFQ12830 3046 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 CELSR3Q9NYQ7 3312 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 KIAA1549LQ6ZVL6 1849 aa13.23□□□□□ -0.29
SSR4-205ENST00000447375 HCRTO43612 131 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 OPHN1O60890 802 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 ATP2C2O75185 946 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 FGFR1OPO95684 399 aaKnown RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 GNA14O95837 355 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 PDGFRBP09619 1106 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 P4HA1P13674 534 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 ARSAP15289 507 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 PIK3CAP42336 1068 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 CDH8P55286 799 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 MARSP56192 900 aaKnown RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 NLRP12P59046 1061 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 NAIF1Q69YI7 327 aaPredicted RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 ARMCX6Q7L4S7 300 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 LPCAT2Q7L5N7 544 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 ITIH5Q86UX2 942 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 TTC9BQ8N6N2 239 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 ADAMTS14Q8WXS8 1223 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 EZH1Q92800 747 aaPredicted RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 ELMO3Q96BJ8 720 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 CNOT6LQ96LI5 555 aaKnown RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 UBL7Q96S82 380 aaPredicted RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 GTPBP2Q9BX10 602 aaKnown RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 ABCB6Q9NP58 842 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 COQ4Q9Y3A0 265 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 NME7Q9Y5B8 376 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 PCDHB5Q9Y5E4 795 aa13.22□□□□□ -0.29
SSR4-205ENST00000447375 HELZ2Q9BYK8 2649 aaKnown RBP13.22□□□□□ -0.29
SSR4-205ENST00000447375 THADAQ6YHU6 1953 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 PMM2O15305 246 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 MAP3K13O43283 966 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 CFIP05156 583 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 HAPLN1P10915 354 aaPredicted RBP13.21□□□□□ -0.29
SSR4-205ENST00000447375 GJA4P35212 333 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 DPP6P42658 865 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 MXI1P50539 228 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 TRIP6Q15654 476 aaKnown RBP13.21□□□□□ -0.29
SSR4-205ENST00000447375 MAPRE1Q15691 268 aaKnown RBP13.21□□□□□ -0.29
SSR4-205ENST00000447375 DPCR1Q3MIW9 517 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 CCDC40Q4G0X9 1142 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 CBWD6Q4V339 395 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 DCAF17Q5H9S7 520 aaPredicted RBP13.21□□□□□ -0.29
SSR4-205ENST00000447375 CT47A1Q5JQC4 288 aaPredicted RBP13.21□□□□□ -0.29
SSR4-205ENST00000447375 CBWD3Q5JTY5 395 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 CBWD5Q5RIA9 395 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 TCERG1LQ5VWI1 586 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
SSR4-205ENST00000447375 TRIM59Q8IWR1 403 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 TMEFF1Q8IYR6 380 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 CMTM8Q8IZV2 173 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 PNPLA1Q8N8W4 532 aa13.21□□□□□ -0.29
SSR4-205ENST00000447375 FBXL13Q8NEE6 735 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms