RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 CHRM1P11229 460 aaPredicted RBP19.25■□□□□ 0.67
COL9A1-205ENST00000447041 KRT13P13646 458 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 CD58P19256 250 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 DGKEP52429 567 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 PLK5Q496M5 336 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 LY6G5CQ5SRR4 150 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 CLEC20AQ6ZU45 233 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 BBS7Q8IWZ6 715 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 CCDC33Q8N5R6 958 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 CCDC26Q8TAB7 109 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 ZC3H10Q96K80 434 aaKnown RBP19.25■□□□□ 0.67
COL9A1-205ENST00000447041 PNKPQ96T60 521 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 TPSD1Q9BZJ3 242 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 NIF3L1Q9GZT8 377 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 DUSP15Q9H1R2 295 aaPredicted RBP19.25■□□□□ 0.67
COL9A1-205ENST00000447041 SMOC1Q9H4F8 434 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 TBC1D14Q9P2M4 693 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 MMP17Q9ULZ9 603 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 SH3BP1Q9Y3L3 701 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
COL9A1-205ENST00000447041 HHLA1C9JL84 531 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 TLR5O60602 858 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 KAT7O95251 611 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 HNRNPLP14866 589 aaKnown RBP eCLIP19.24■□□□□ 0.67
COL9A1-205ENST00000447041 PSMC2P35998 433 aaKnown RBP19.24■□□□□ 0.67
COL9A1-205ENST00000447041 EIF2DP41214 584 aaKnown RBP19.24■□□□□ 0.67
COL9A1-205ENST00000447041 ADAM9Q13443 819 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 AASDHQ4L235 1098 aaPredicted RBP19.24■□□□□ 0.67
COL9A1-205ENST00000447041 WHAMMQ8TF30 809 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 EEF2KMTQ96G04 330 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 HNRNPABQ99729 332 aaKnown RBP19.24■□□□□ 0.67
COL9A1-205ENST00000447041 NT5C1AQ9BXI3 368 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 NACA2Q9H009 215 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 FBXO44Q9H4M3 255 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 TMEM8AQ9HCN3 771 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 ZDHHC4Q9NPG8 344 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 RXFP3Q9NSD7 469 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 INVSQ9Y283 1065 aa19.24■□□□□ 0.67
COL9A1-205ENST00000447041 CYP26A1O43174 497 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 CILPO75339 1184 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 APODP05090 189 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 RPL13P26373 211 aaKnown RBP19.23■□□□□ 0.67
COL9A1-205ENST00000447041 TIE1P35590 1138 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 MPLP40238 635 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 PNOCQ13519 176 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 ANO7Q6IWH7 933 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 TMEM92Q6UXU6 159 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 PHTF2Q8N3S3 785 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 ALLCQ8N6M5 410 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 OTUB2Q96DC9 234 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 CYFIP2Q96F07 1278 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 CYP3A43Q9HB55 503 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 ARHGEF4Q9NR80 690 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 TLR8Q9NR97 1041 aaKnown RBP19.23■□□□□ 0.67
COL9A1-205ENST00000447041 OSER1Q9NX31 292 aa19.23■□□□□ 0.67
COL9A1-205ENST00000447041 FOXD2O60548 495 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-205ENST00000447041 KLF8O95600 359 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-205ENST00000447041 TBX18O95935 607 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 ZNF806P0C7X5 589 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 MRPS21P82921 87 aaKnown RBP19.22■□□□□ 0.67
COL9A1-205ENST00000447041 GAD2Q05329 585 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 ENPEPQ07075 957 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 CRY1Q16526 586 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 EDRF1Q3B7T1 1238 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 PLA2G2CQ5R387 149 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 EMC10Q5UCC4 262 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 KRT39Q6A163 491 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 RASSF3Q86WH2 238 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 ETFBKMTQ8IXQ9 262 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 NAT16Q8N8M0 369 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 C12orf50Q8NA57 414 aaPredicted RBP19.22■□□□□ 0.67
COL9A1-205ENST00000447041 IL17RCQ8NAC3 791 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 TXNDC5Q8NBS9 432 aaKnown RBP19.22■□□□□ 0.67
COL9A1-205ENST00000447041 MDGA1Q8NFP4 955 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 SEMA4DQ92854 862 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 PCDHGA5Q9Y5G8 931 aa19.22■□□□□ 0.67
COL9A1-205ENST00000447041 SGK1O00141 431 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 HOXC11O43248 304 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-205ENST00000447041 GREM1O60565 184 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 TRIM21P19474 475 aaKnown RBP19.21■□□□□ 0.67
COL9A1-205ENST00000447041 ACO1P21399 889 aaKnown RBP19.21■□□□□ 0.67
COL9A1-205ENST00000447041 GBP1P32455 592 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 KIR2DL1P43626 348 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-205ENST00000447041 ELF2Q15723 593 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 ZNF394Q53GI3 561 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 TTC30AQ86WT1 665 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 TMEM25Q86YD3 366 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 CNOT6LQ96LI5 555 aaKnown RBP19.21■□□□□ 0.67
COL9A1-205ENST00000447041 DUSP9Q99956 384 aaKnown RBP19.21■□□□□ 0.67
COL9A1-205ENST00000447041 KLF16Q9BXK1 252 aaPredicted RBP19.21■□□□□ 0.67
COL9A1-205ENST00000447041 NMUR1Q9HB89 426 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 CYLDQ9NQC7 956 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 SPHK2Q9NRA0 654 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 SCML2Q9UQR0 700 aa19.21■□□□□ 0.67
COL9A1-205ENST00000447041 NCOR2Q9Y618 2525 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 A0A0A0MRY4 1105 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 A0A1W2PQH9 124 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.2■□□□□ 0.66
COL9A1-205ENST00000447041 MDM4O15151 490 aa19.2■□□□□ 0.66
COL9A1-205ENST00000447041 TULP3O75386 442 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms