RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 SLC4A5Q9BY07 1137 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 LHX5Q9H2C1 402 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 ATXN3LQ9H3M9 355 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 CSNK1G1Q9HCP0 422 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 TMPRSS4Q9NRS4 437 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 KLHL11Q9NVR0 708 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 BCCIPQ9P287 314 aaKnown RBP eCLIP7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 DNMT3BQ9UBC3 853 aaKnown RBP7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 SFMBT1Q9UHJ3 866 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 RASAL2Q9UJF2 1139 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 NENFQ9UMX5 172 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 GUCA1BQ9UMX6 200 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 PPP2R2CQ9Y2T4 447 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 SNX10Q9Y5X0 201 aa7.94□□□□□ -1.14
SF3A3P1-201ENST00000446317 CARNS1A5YM72 827 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ARHGAP6O43182 974 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 TADA3O75528 432 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 IPO7O95373 1038 aaKnown RBP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 LSM8O95777 96 aaKnown RBP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 TCF4P15884 667 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 KCNA5P22460 613 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 RFC1P35251 1148 aaPredicted RBP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 FLT3P36888 993 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 GGCXP38435 758 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 SULT1E1P49888 294 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 DAOAP59103 153 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 YWHAGP61981 247 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 GPC5P78333 572 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 CDK17Q00537 523 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 TFF2Q03403 129 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 EFEMP1Q12805 493 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 NME3Q13232 169 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 MESDQ14696 234 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 LLGL1Q15334 1064 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ANKRD54Q6NXT1 300 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 DCUN1D2Q6PH85 259 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 SYCE2Q6PIF2 218 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 OLFML1Q6UWY5 402 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 VSTM1Q6UX27 236 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 CCDC149Q6ZUS6 474 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 PHF13Q86YI8 300 aaPredicted RBP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 MIB1Q86YT6 1006 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 CCDC170Q8IYT3 715 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 DEFB106AQ8N104 65 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ELMOD1Q8N336 334 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 CCDC112Q8NEF3 446 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 SLC35G2Q8TBE7 412 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 CTNNBL1Q8WYA6 563 aaPredicted RBP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 KHSRPQ92945 711 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 WBP2Q969T9 261 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 MCRS1Q96EZ8 462 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 FUBP3Q96I24 572 aaKnown RBP eCLIP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ZSWIM3Q96MP5 696 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 SLC22A12Q96S37 553 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 OXCT2Q9BYC2 517 aaPredicted RBP7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ADAM33Q9BZ11 813 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 MAGEB5Q9BZ81 275 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ISCUQ9H1K1 167 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 SLITRK6Q9H5Y7 841 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 SLC24A3Q9HC58 644 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ABCB6Q9NP58 842 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 GPATCH2LQ9NWQ4 482 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 CLEC1BQ9P126 229 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 CALCOCO1Q9P1Z2 691 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 ANAPC7Q9UJX3 599 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 IRAK3Q9Y616 596 aa7.93□□□□□ -1.14
SF3A3P1-201ENST00000446317 TRIOBPQ9H2D6 2365 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 CAPN9O14815 690 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 NCK2O43639 380 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 NRDCO43847 1150 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 FTCDO95954 541 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 MOCS2O96007 188 aaPredicted RBP7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 CALB1P05937 261 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 FYNP06241 537 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 RHOP08100 348 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 NCAM1P13591 858 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 RARGP13631 454 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 CDH5P33151 784 aaPredicted RBP7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 ARHGAP25P42331 645 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 VAV2P52735 878 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 MRPS5P82675 430 aaKnown RBP7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 SLC6A3Q01959 620 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 ADAM15Q13444 863 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 MAMLD1Q13495 774 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 DCAF6Q58WW2 860 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 RAB41Q5JT25 222 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 C10orf120Q5SQS8 335 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 BSPRYQ5W0U4 402 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 BTBD8Q5XKL5 378 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 PDE12Q6L8Q7 609 aaKnown RBP7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 SCYL2Q6P3W7 929 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 GAREM2Q75VX8 874 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 PDZD4Q76G19 769 aaPredicted RBP7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 RSRC2Q7L4I2 434 aaKnown RBP7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 TMEM150AQ86TG1 271 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 TMEM110Q86TL2 294 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 TMC8Q8IU68 726 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 FMNL3Q8IVF7 1028 aa7.92□□□□□ -1.14
SF3A3P1-201ENST00000446317 EFHBQ8N7U6 833 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms