RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 CCDC105Q8IYK2 499 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 SCYL3Q8IZE3 742 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 AGGF1Q8N302 714 aaeCLIP4.16□□□□□ -1.74
UBR3-206ENST00000444475 ZCCHC7Q8N3Z6 543 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 ZNF565Q8N9K5 539 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 HIPK4Q8NE63 616 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 SLC13A3Q8WWT9 602 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 NCSTNQ92542 709 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 FGD4Q96M96 766 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ELF4Q99607 663 aaPredicted RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 LLPHQ9BRT6 129 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 TUBB2BQ9BVA1 445 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 PACSIN1Q9BY11 444 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 ZNF518BQ9C0D4 1074 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 RPRD1BQ9NQG5 326 aaKnown RBP4.16□□□□□ -1.74
UBR3-206ENST00000444475 TOPBP1Q92547 1522 aa4.16□□□□□ -1.74
UBR3-206ENST00000444475 URADA6NGE7 173 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 WNT7AO00755 349 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 DIAPH2O60879 1101 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 ERLIN1O75477 346 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 ZNF821O75541 412 aaPredicted RBP4.15□□□□□ -1.74
UBR3-206ENST00000444475 UBOX5O94941 541 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PDE8BO95263 885 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PRAMEF12O95522 483 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PRKCBP05771 671 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 IVLP07476 585 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 UBE2HP62256 183 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PPIDQ08752 370 aaKnown RBP4.15□□□□□ -1.74
UBR3-206ENST00000444475 MTX1Q13505 466 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 RBM20Q5T481 1227 aaKnown RBP4.15□□□□□ -1.74
UBR3-206ENST00000444475 ATG16L1Q676U5 607 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 C8orf74Q6P047 294 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 CYP20A1Q6UW02 462 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PPP1R21Q6ZMI0 780 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 LINC00346Q8IVM7 164 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PHACTR4Q8IZ21 702 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 FAM9CQ8IZT9 166 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 KIF18AQ8NI77 898 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 SCAMP5Q8TAC9 235 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 RMDN1Q96DB5 314 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 ZFYVE21Q9BQ24 234 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 WDR18Q9BV38 432 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PRR14Q9BWN1 585 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 ACE2Q9BYF1 805 aaPredicted RBP4.15□□□□□ -1.74
UBR3-206ENST00000444475 GPR62Q9BZJ7 368 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 IGFLR1Q9H665 355 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 KCNK13Q9HB14 408 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 LTB4R2Q9NPC1 389 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 KLHL20Q9Y2M5 609 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 PHLPP2Q6ZVD8 1323 aa4.15□□□□□ -1.74
UBR3-206ENST00000444475 MED1Q15648 1581 aaPredicted RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 GOLGA8CPA6NN73 597 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 PTGES3LE9PB15 166 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ATMINO43313 823 aaPredicted RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 INHBAP08476 426 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 CPN2P22792 545 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 PTBP1P26599 531 aaKnown RBP eCLIP4.15□□□□□ -1.752e-7■■■■■ 46.1
UBR3-206ENST00000444475 EIF3EP60228 445 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 HERVK_113P62684 666 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ERVK-24P63145 666 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SH3BP2P78314 561 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 PTP4A2Q12974 167 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 IL24Q13007 206 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 LRRC14Q15048 493 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 AANATQ16613 207 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 TOR2AQ5JU69 321 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ATXN7L2Q5T6C5 722 aaPredicted RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 GTF2IRD2BQ6EKJ0 949 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 C1orf186Q6ZWK4 172 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 UBE3BQ7Z3V4 1068 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 GTF2IRD2Q86UP8 949 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SLC22A9Q8IVM8 553 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ADGRG2Q8IZP9 1017 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 PHOSPHO2Q8TCD6 241 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 CORO2AQ92828 525 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 KAT2BQ92831 832 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SLC22A18Q96BI1 424 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SUCLG2Q96I99 432 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 C7orf34Q96L11 122 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 HNRNPABQ99729 332 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 FAM83CQ9BQN1 747 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SMG9Q9H0W8 520 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 STN1Q9H668 368 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 NDUFAF4Q9P032 175 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 AMACRQ9UHK6 382 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ZNF451Q9Y4E5 1061 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 SNX9Q9Y5X1 595 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 LYVE1Q9Y5Y7 322 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 FPGT-TNNI3KV9GXZ4 949 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 OR6C65A6NJZ3 312 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 C1QTNF9BB2RNN3 333 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 AXIN1O15169 862 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 YKT6O15498 198 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 HNRNPRO43390 633 aaKnown RBP4.15□□□□□ -1.75
UBR3-206ENST00000444475 ADH1CP00326 375 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 GLI1P08151 1106 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 ARP10275 920 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 NPR1P16066 1061 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 PTPN3P26045 913 aa4.15□□□□□ -1.75
UBR3-206ENST00000444475 TTKP33981 857 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms