RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SNX30Q5VWJ9 437 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 MCTP1Q6DN14 999 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 TAF2Q6P1X5 1199 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 RASGRP2Q7LDG7 609 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 ABI1Q8IZP0 508 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 USP38Q8NB14 1042 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 KCNN1Q92952 543 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 TRIM5Q9C035 493 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 USP44Q9H0E7 712 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 TMEM168Q9H0V1 697 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 RMI1Q9H9A7 625 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 IL21RQ9HBE5 538 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 GBA2Q9HCG7 927 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 SH3GLB2Q9NR46 395 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZDHHC9Q9Y397 364 aa4.52□□□□□ -1.69
CDC42BPA-207ENST00000441725 BTBD11A6QL63 1104 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 KLK10O43240 276 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 CYP1A1P04798 512 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLC3A2P08195 630 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ALOX12P18054 663 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TGM1P22735 817 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 GGT5P36269 586 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 PGM1P36871 562 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 IRAK1P51617 712 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 PRKAG1P54619 331 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ARF3P61204 181 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ARF1P84077 181 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 DLX2Q07687 328 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 SF3A3Q12874 501 aaKnown RBP eCLIP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 RIN1Q13671 783 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 E2F5Q15329 346 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TAF11Q15544 211 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 BAK1Q16611 211 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 DGAT2L7PQ6IED9 249 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TAPT1Q6NXT6 567 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ATG4DQ86TL0 474 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZFPM1Q8IX07 1006 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZFP28Q8NHY6 868 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZBTB45Q96K62 511 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 SMOQ99835 787 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TTPALQ9BTX7 342 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 BARX1Q9HBU1 254 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 NAALADL1Q9UQQ1 740 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 NR2E1Q9Y466 385 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 EFCAB8A8MWE9 144 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 B4DLN1 442 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 ADM5C9JUS6 153 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 AGPSO00116 658 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TOR1BO14657 336 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 CD3EAPO15446 510 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TSPAN3O60637 253 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 PEX10O60683 326 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 SGPL1O95470 568 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 DNTTP04053 509 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 LOXL3P58215 753 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TBCEQ15813 527 aaPredicted RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 DNAJC21Q5F1R6 531 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 MCTP2Q6DN12 878 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TMEM132EQ6IEE7 984 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 MSANTD2Q6P1R3 559 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 SYNE3Q6ZMZ3 975 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 SNX32Q86XE0 403 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 NDUFAF2Q8N183 169 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TMEM171Q8WVE6 324 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 APOPT1Q96IL0 206 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 PHACTR3Q96KR7 559 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 WDR24Q96S15 920 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 RANBP17Q9H2T7 1088 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 AGO3Q9H9G7 860 aaKnown RBP4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 PLEKHA2Q9HB19 425 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 GCM1Q9NP62 436 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 PLSCR4Q9NRQ2 329 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 RAD54BQ9Y620 910 aa4.51□□□□□ -1.69
CDC42BPA-207ENST00000441725 TEX51A0A1B0GUA7 166 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 TRIM64CA6NLI5 447 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 DRGXA6NNA5 263 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 MATN2O00339 956 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 MLYCDO95822 493 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 KCNA2P16389 499 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 LRPAP1P30533 357 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 HOXC13P31276 330 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 PSMC2P35998 433 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 GCLCP48506 637 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 TDGQ13569 410 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 NFYCQ13952 458 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 CSHL1Q14406 222 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 LRRC24Q50LG9 513 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ANO7Q6IWH7 933 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 MPZL3Q6UWV2 235 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 LAYNQ6UX15 382 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 TMEM108Q6UXF1 575 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 GPRIN1Q7Z2K8 1008 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 LMNTD2Q8IXW0 634 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 SPARTQ8N0X7 666 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 LINS1Q8NG48 757 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ATRIPQ8WXE1 791 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 KTI12Q96EK9 354 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms