RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 C6orf229H3BNL8 230 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 COPEO14579 308 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ZNF195O14628 629 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 CHADO15335 359 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 GSRP00390 522 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 SNRPAP09012 282 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 ZSCAN5DPP0CG00 497 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ZNF24P17028 368 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ACO1P21399 889 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 NSFP46459 744 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 AQP5P55064 265 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 HDAC4P56524 1084 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 DPYSQ14117 519 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 KCNJ11Q14654 390 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 RARS2Q5T160 578 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 BBS12Q6ZW61 710 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 PPM1KQ8N3J5 372 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 LRRC39Q96DD0 335 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 RTP4Q96DX8 246 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 CNDP2Q96KP4 475 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 WDR18Q9BV38 432 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 HACD3Q9P035 362 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 FADS3Q9Y5Q0 445 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 TCRBV9S1A1TA0A576 114 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 SFI1A8K8P3 1242 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 PGM3O95394 542 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 INHBBP09529 407 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ADSLP30566 484 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 CPA2P48052 419 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 CCDC92Q53HC0 331 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 LGSNQ5TDP6 509 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 WDR78Q5VTH9 848 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 DPP8Q6V1X1 898 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 TMEM110Q86TL2 294 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 KSR1Q8IVT5 923 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 TPH2Q8IWU9 490 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ABRAQ8N0Z2 381 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 PDIK1LQ8N165 341 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 DNAJC1Q96KC8 554 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 CNDP1Q96KN2 507 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 RIT2Q99578 217 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 CORO1BQ9BR76 489 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 PTBP2Q9UKA9 531 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 B3GNT3Q9Y2A9 372 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 KRT37O76014 449 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 BAIAP3O94812 1187 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 C6orf222P0C671 652 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 CDH5P33151 784 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 MLH1P40692 756 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 PSMD8P48556 350 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 GALK1P51570 392 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 HK2P52789 917 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 CYP4A11Q02928 519 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ZNF252P-AS1Q0IIN9 211 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 STX3Q13277 289 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 PDAP1Q13442 181 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 TRIP10Q15642 601 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ANKRD22Q5VYY1 191 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 MFSD7Q6UXD7 560 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 CDHR3Q6ZTQ4 885 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 MAP4K3Q8IVH8 894 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 ARID3BQ8IVW6 561 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 THNSL1Q8IYQ7 743 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 UBR7Q8N806 425 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 PIWIL2Q8TC59 973 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 TTC17Q96AE7 1141 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 CBWD1Q9BRT8 395 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 TDRD1Q9BXT4 1180 aaKnown RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 GIN1Q9NXP7 522 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 WRAP73Q9P2S5 460 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 CTDP1Q9Y5B0 961 aaPredicted RBP8.16□□□□□ -1.1
LMO3-208ENST00000441439 AP4B1Q9Y6B7 739 aa8.16□□□□□ -1.1
LMO3-208ENST00000441439 C2orf71A6NGG8 1288 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 K7ENM7 598 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 TMEM63AO94886 807 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 EIF2S1P05198 315 aaKnown RBP8.15□□□□□ -1.1
LMO3-208ENST00000441439 WEE2P0C1S8 567 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 POLR2MP0CAP2 368 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 RELAQ04206 551 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 KDSRQ06136 332 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 PIGHQ14442 188 aaPredicted RBP8.15□□□□□ -1.1
LMO3-208ENST00000441439 RFTN1Q14699 578 aaPredicted RBP8.15□□□□□ -1.1
LMO3-208ENST00000441439 MBLAC2Q68D91 279 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 ELMSAN1Q6PJG2 1045 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 NIPA1Q7RTP0 329 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 CARM1Q86X55 608 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 TERB1Q8NA31 727 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 COX4I2Q96KJ9 171 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 ZNF597Q96LX8 424 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 ZNF778Q96MU6 729 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 TMEM247A6NEH6 219 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 DKC1O60832 514 aaKnown RBP eCLIP8.15□□□□□ -1.1
LMO3-208ENST00000441439 SIN3BO75182 1162 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 LSM8O95777 96 aaKnown RBP8.15□□□□□ -1.1
LMO3-208ENST00000441439 INHBAP08476 426 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 ETS1P14921 441 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 MMP8P22894 467 aa8.15□□□□□ -1.1
LMO3-208ENST00000441439 RPL22P35268 128 aaKnown RBP8.15□□□□□ -1.1
LMO3-208ENST00000441439 PPARGP37231 505 aaPredicted RBP8.15□□□□□ -1.1
LMO3-208ENST00000441439 GABRB2P47870 512 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms