RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 TAZQ16635 292 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 SLC10A6Q3KNW5 377 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 KHDC1Q4VXA5 237 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 ALYREFQ86V81 257 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 PLD5Q8N7P1 536 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 MICAL1Q8TDZ2 1067 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 IQCGQ9H095 443 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 USP29Q9HBJ7 922 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 ATP5HO75947 161 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 IL4RP24394 825 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 BCAR1P56945 870 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 PARP6Q2NL67 630 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 PMF1Q6P1K2 205 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 TRMT10BQ6PF06 316 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 ARMC2Q8NEN0 867 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 SLC44A1Q8WWI5 657 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 KCNN1Q92952 543 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 SRPK1Q96SB4 655 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 CADM1Q9BY67 442 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 VPS11Q9H270 941 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 ZC3H7BQ9UGR2 993 aaKnown RBP14.11□□□□□ -0.15
HERPUD1-204ENST00000439977 C2CD4BA6NLJ0 364 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 HAUS5O94927 633 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 TPBGLP0DKB5 382 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 INSRRP14616 1297 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 CALB2P22676 271 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 KCNJ11Q14654 390 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 CCDC14Q49A88 953 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 MROH9Q5TGP6 573 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 POTEAQ6S8J7 498 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 ACOT1Q86TX2 421 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 RPAINQ86UA6 219 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 UNC5BQ8IZJ1 945 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 C7orf31Q8N865 590 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 FAM172AQ8WUF8 416 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 RNF157Q96PX1 679 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 SMYD2Q9NRG4 433 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 WDR35Q9P2L0 1181 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 ADM5C9JUS6 153 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 COPEO14579 308 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 TM9SF1O15321 606 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 ZBED1O96006 694 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 PTPN4P29074 926 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 ETV4P43268 484 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 YWHAZP63104 245 aaKnown RBP14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 ILDR2Q71H61 639 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 MPP5Q8N3R9 675 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 DTX3LQ8TDB6 740 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 CLEC4CQ8WTT0 213 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 STK32AQ8WU08 396 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 INPP5DQ92835 1189 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 FGD4Q96M96 766 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 ACAP3Q96P50 834 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 CNPY3Q9BT09 278 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 SLC17A6Q9P2U8 582 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 TNFSF13BQ9Y275 285 aa14.1□□□□□ -0.15
HERPUD1-204ENST00000439977 SSC5DA1L4H1 1573 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PPEF2O14830 753 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PDHA1P08559 390 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 ARF4P18085 180 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 STIP1P31948 543 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 SERPINB4P48594 390 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 RASSF2P50749 326 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 CRADDP78560 199 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 TMEM62Q0P6H9 643 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 RASA2Q15283 850 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 GOLGA7BQ2TAP0 167 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PPP1R26Q5T8A7 1209 aaPredicted RBP14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 ZCCHC23Q6ZST2 131 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PCDH19Q8TAB3 1148 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 CXorf38Q8TB03 319 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 APOPT1Q96IL0 206 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 GYG2O15488 501 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 ABL2P42684 1182 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 GBE1Q04446 702 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 CES4AQ5XG92 561 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 RINLQ6ZS11 566 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 CAND1Q86VP6 1230 aaKnown RBP14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PQLC3Q8N755 202 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 NMUR2Q9GZQ4 415 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PPCSQ9HAB8 311 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PLAC1Q9HBJ0 212 aa14.09□□□□□ -0.15
HERPUD1-204ENST00000439977 PARP14Q460N5 1801 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 METTL18O95568 372 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 DLDP09622 509 aaKnown RBP14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 ZNF286BP0CG31 522 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 PTDSS1P48651 473 aaKnown RBP14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 TMEM132DQ14C87 1099 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 GLRA4Q5JXX5 417 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 SH2D5Q6ZV89 423 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 PDZD7Q9H5P4 517 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 PCMTD2Q9NV79 361 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 GPRC5DQ9NZD1 345 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 MFHAS1Q9Y4C4 1052 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 HES2Q9Y543 173 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 SNX9Q9Y5X1 595 aa14.08□□□□□ -0.15
HERPUD1-204ENST00000439977 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 IL18RAPO95256 599 aa14.08□□□□□ -0.16
HERPUD1-204ENST00000439977 PFKMP08237 780 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms