RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 ERCC4Q92889 916 aaPredicted RBP21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 ACDQ96AP0 544 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 TIGD1Q96MW7 591 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 HHIPQ96QV1 700 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 TLR8Q9NR97 1041 aaKnown RBP21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 RAB20Q9NX57 234 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 NCOR2Q9Y618 2525 aa21.46■■□□□ 1.03
NCKIPSD-206ENST00000439518 MYO16Q9Y6X6 1858 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 DNAH14Q0VDD8 3507 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 PRR5-ARHGAP8B1AHC4 643 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 SLC16A3O15427 465 aaKnown RBP21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 TLR5O60602 858 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 SMC2O95347 1197 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 ADH1CP00326 375 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 EIF2DP41214 584 aaKnown RBP21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 PMS1P54277 932 aaKnown RBP21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 ARHGAP8P85298 464 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 MESP2Q0VG99 397 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 LY6G5CQ5SRR4 150 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 ANKRD40Q6AI12 368 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 WBP2Q969T9 261 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 CYLDQ9NQC7 956 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 KIAA1549LQ6ZVL6 1849 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 MYH10P35580 1976 aa21.45■■□□□ 1.02
NCKIPSD-206ENST00000439518 ANTXRLA6NF34 631 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 RPP40O75818 363 aaKnown RBP21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 TBX18O95935 607 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 CHRM1P11229 460 aaPredicted RBP21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 ADH5P11766 374 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 SLC6A11P48066 632 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 FKBP3Q00688 224 aaKnown RBP21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 C12orf40Q86WS4 652 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 TTC39CQ8N584 583 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 SMARCE1Q969G3 411 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 PNKPQ96T60 521 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 GTPBP4Q9BZE4 634 aaKnown RBP21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 CISHQ9NSE2 258 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 OSER1Q9NX31 292 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 EBF1Q9UH73 591 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 COQ4Q9Y3A0 265 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 SH3BP1Q9Y3L3 701 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 MYOFQ9NZM1 2061 aa21.44■■□□□ 1.02
NCKIPSD-206ENST00000439518 SPAG17Q6Q759 2223 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 SPTBN2O15020 2390 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 A0A0A0MRY4 1105 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 AXIN1O15169 862 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 CYP26A1O43174 497 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 GREM1O60565 184 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 APBB3O95704 486 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 ACO1P21399 889 aaKnown RBP21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 SDHBP21912 280 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 KIF11P52732 1056 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 CSRP2Q16527 193 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 CBWD6Q4V339 395 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 C2orf27AQ580R0 203 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 CBWD3Q5JTY5 395 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 CBWD5Q5RIA9 395 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 PPP1R26Q5T8A7 1209 aaPredicted RBP21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 DGLUCYQ7Z3D6 616 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 CACNA2D4Q7Z3S7 1137 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 SFTPA1Q8IWL2 248 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 BBS7Q8IWZ6 715 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 JAKMIP2Q96AA8 810 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 LOXL4Q96JB6 756 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 TSG101Q99816 390 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 ARID3AQ99856 593 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 KLF16Q9BXK1 252 aaPredicted RBP21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 DUSP16Q9BY84 665 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 DNAI2Q9GZS0 605 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 FAM124BQ9H5Z6 455 aaPredicted RBP21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 SEMA4GQ9NTN9 838 aa21.43■■□□□ 1.02
NCKIPSD-206ENST00000439518 HOXC11O43248 304 aaPredicted RBP21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 KAT7O95251 611 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 ATP5C1P36542 298 aaKnown RBP21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 RAD23BP54727 409 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 SEC13P55735 322 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 LRRC63Q05C16 580 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 ZNF394Q53GI3 561 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 HTR3DQ70Z44 454 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 KBTBD6Q86V97 674 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 ETFBKMTQ8IXQ9 262 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 ELOA2Q8IYF1 753 aaPredicted RBP21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 PHTF2Q8N3S3 785 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 SLC4A11Q8NBS3 891 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 TATDN2Q93075 761 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 ZC3H10Q96K80 434 aaKnown RBP21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 HEXIM2Q96MH2 286 aaKnown RBP21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 NACA2Q9H009 215 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 NMUR1Q9HB89 426 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 HOOK1Q9UJC3 728 aaKnown RBP21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 MMP17Q9ULZ9 603 aa21.42■■□□□ 1.02
NCKIPSD-206ENST00000439518 EML5Q05BV3 1969 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 CCDC192P0DO97 292 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 GRIA2P42262 883 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 MRPS21P82921 87 aaKnown RBP21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 GAD2Q05329 585 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 TCERG1LQ5VWI1 586 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 KLHDC10Q6PID8 442 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 CCDC186Q7Z3E2 898 aa21.41■■□□□ 1.02
NCKIPSD-206ENST00000439518 SCD5Q86SK9 330 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms