RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CNTN3Q9P232 1028 aa17.08■□□□□ 0.33
CLCNKA-203ENST00000439316 ABT1Q9ULW3 272 aaKnown RBP17.08■□□□□ 0.33
CLCNKA-203ENST00000439316 A0A0G2JND7 137 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 ZBTB42B2RXF5 422 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 MICAL2O94851 1124 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 LMNAP02545 664 aaKnown RBP17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 PAX7P23759 505 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 ABL2P42684 1182 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 ARFIP2P53365 341 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 CDK16Q00536 496 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 PTPN11Q06124 597 aaPredicted RBP17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 FAAP100Q0VG06 881 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 ATF7IP2Q5U623 682 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 METTL7BQ6UX53 244 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 CYP4V2Q6ZWL3 525 aaPredicted RBP17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 TWNKQ96RR1 684 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 CALN1Q9BXU9 219 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 CADM1Q9BY67 442 aaKnown RBP17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 ALG13Q9NP73 1137 aaKnown RBP17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 ARL8BQ9NVJ2 186 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 HEY2Q9UBP5 337 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 HMGXB4Q9UGU5 601 aa17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 MTO1Q9Y2Z2 717 aaKnown RBP17.08■□□□□ 0.32
CLCNKA-203ENST00000439316 CENPFP49454 3210 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 FAM155AB1AL88 458 aaPredicted RBP17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 ACKR2O00590 384 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 CHADO15335 359 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 CCDC22O60826 627 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 ENTPD5O75356 428 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 FAM155BO75949 473 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 INHBAP08476 426 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 CDH8P55286 799 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 ORC1Q13415 861 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 GRB14Q14449 540 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 EEF1DP3Q658K8 133 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 CCDC62Q6P9F0 684 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 DARS2Q6PI48 645 aaKnown RBP17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 NPNTQ6UXI9 565 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 PLEKHH3Q7Z736 793 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 DPP9Q86TI2 863 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 IFNL1Q8IU54 200 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 LRRC71Q8N4P6 559 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 CEP120Q8N960 986 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 FAM111AQ96PZ2 611 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 TMEM120AQ9BXJ8 343 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 TRIM6Q9C030 488 aaPredicted RBP17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 ELOVL4Q9GZR5 314 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 SMYD3Q9H7B4 428 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 ASNSD1Q9NWL6 643 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 IKBKGQ9Y6K9 419 aa17.07■□□□□ 0.32
CLCNKA-203ENST00000439316 CILPO75339 1184 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 IL18RAPO95256 599 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 C1QAP02745 245 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 DLDP09622 509 aaKnown RBP17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 ZNF143P52747 638 aaPredicted RBP17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 OSTNP61366 133 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 YWHAGP61981 247 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 KRT72Q14CN4 511 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 SMC1BQ8NDV3 1235 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 BTBD10Q9BSF8 475 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 FZD8Q9H461 694 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 TTLL3Q9Y4R7 772 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 KLF11O14901 512 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 B4GALT5O43286 388 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 KRT19P08727 400 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 CXCL8P10145 99 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 TXNP10599 105 aaKnown RBP17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 PYGBP11216 843 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 BGNP21810 368 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 CDC25CP30307 473 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 TFDP2Q14188 446 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 HSDL1Q3SXM5 330 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 FAM47CQ5HY64 1035 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 CELF3Q5SZQ8 465 aaKnown RBP17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 FAM91A1Q658Y4 838 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 RFWD3Q6PCD5 774 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 EXOC8Q8IYI6 725 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 TEX9Q8N6V9 391 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 C1orf127Q8N9H9 656 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 COPS5Q92905 334 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 TTC17Q96AE7 1141 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 NSL1Q96IY1 281 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 ADPGKQ9BRR6 497 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 CDT1Q9H211 546 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 DCLRE1BQ9H816 532 aa17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 CORO1CQ9ULV4 474 aaPredicted RBP17.06■□□□□ 0.32
CLCNKA-203ENST00000439316 CFAP69A5D8W1 941 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 M0QYV0 167 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 LGR5O75473 907 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 NFICP08651 508 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 GPD1P21695 349 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 SERPINB3P29508 390 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 GPD2P43304 727 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 SERPINB4P48594 390 aa17.05■□□□□ 0.32
CLCNKA-203ENST00000439316 PTDSS1P48651 473 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms