RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 ANGEL2Q5VTE6 544 aaKnown RBP16.01■□□□□ 0.15
APP-208ENST00000439274 RFX8Q6ZV50 586 aa16.01■□□□□ 0.15
APP-208ENST00000439274 RXFP2Q8WXD0 754 aa16.01■□□□□ 0.15
APP-208ENST00000439274 DNAJC9Q8WXX5 260 aa16.01■□□□□ 0.15
APP-208ENST00000439274 OXNAD1Q96HP4 312 aaPredicted RBP16.01■□□□□ 0.15
APP-208ENST00000439274 ANKRD27Q96NW4 1050 aa16.01■□□□□ 0.15
APP-208ENST00000439274 PPP1R16BQ96T49 567 aa16.01■□□□□ 0.15
APP-208ENST00000439274 USP29Q9HBJ7 922 aa16.01■□□□□ 0.15
APP-208ENST00000439274 ASNSD1Q9NWL6 643 aa16.01■□□□□ 0.15
APP-208ENST00000439274 NMRK1Q9NWW6 199 aa16.01■□□□□ 0.15
APP-208ENST00000439274 BTBD7Q9P203 1132 aa16.01■□□□□ 0.15
APP-208ENST00000439274 CORO1CQ9ULV4 474 aaPredicted RBP16.01■□□□□ 0.15
APP-208ENST00000439274 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.01■□□□□ 0.15
APP-208ENST00000439274 SMAPO00193 183 aa16■□□□□ 0.15
APP-208ENST00000439274 DNAJC6O75061 913 aa16■□□□□ 0.15
APP-208ENST00000439274 ESRRAP11474 423 aaPredicted RBP16■□□□□ 0.15
APP-208ENST00000439274 STIP1P31948 543 aaKnown RBP16■□□□□ 0.15
APP-208ENST00000439274 MXD4Q14582 209 aaPredicted RBP16■□□□□ 0.15
APP-208ENST00000439274 MDH1BQ5I0G3 518 aa16■□□□□ 0.15
APP-208ENST00000439274 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
APP-208ENST00000439274 VPS52Q8N1B4 723 aa16■□□□□ 0.15
APP-208ENST00000439274 DTX3LQ8TDB6 740 aa16■□□□□ 0.15
APP-208ENST00000439274 NRG4Q8WWG1 115 aa16■□□□□ 0.15
APP-208ENST00000439274 MCUR1Q96AQ8 359 aa16■□□□□ 0.15
APP-208ENST00000439274 TMEM176AQ96HP8 235 aa16■□□□□ 0.15
APP-208ENST00000439274 HEXIM2Q96MH2 286 aaKnown RBP16■□□□□ 0.15
APP-208ENST00000439274 SLC13A1Q9BZW2 595 aa16■□□□□ 0.15
APP-208ENST00000439274 IQCGQ9H095 443 aaKnown RBP16■□□□□ 0.15
APP-208ENST00000439274 RPF1Q9H9Y2 349 aaKnown RBP16■□□□□ 0.15
APP-208ENST00000439274 SMYD2Q9NRG4 433 aa16■□□□□ 0.15
APP-208ENST00000439274 ZFATQ9P243 1243 aa16■□□□□ 0.15
APP-208ENST00000439274 ANK1P16157 1881 aa16■□□□□ 0.15
APP-208ENST00000439274 DICER1Q9UPY3 1922 aaKnown RBP16■□□□□ 0.15
APP-208ENST00000439274 A6NHS1 94 aa16■□□□□ 0.15
APP-208ENST00000439274 LACTBL1A8MY62 500 aa16■□□□□ 0.15
APP-208ENST00000439274 GPR25O00155 361 aa16■□□□□ 0.15
APP-208ENST00000439274 CYB561D2O14569 222 aa16■□□□□ 0.15
APP-208ENST00000439274 LIN7AO14910 233 aaPredicted RBP16■□□□□ 0.15
APP-208ENST00000439274 CILPO75339 1184 aa16■□□□□ 0.15
APP-208ENST00000439274 TGDSO95455 350 aa16■□□□□ 0.15
APP-208ENST00000439274 LINGO3P0C6S8 592 aa16■□□□□ 0.15
APP-208ENST00000439274 PDGFRAP16234 1089 aa16■□□□□ 0.15
APP-208ENST00000439274 CYP3A5P20815 502 aa16■□□□□ 0.15
APP-208ENST00000439274 GPD1P21695 349 aa16■□□□□ 0.15
APP-208ENST00000439274 RPS12P25398 132 aaKnown RBP16■□□□□ 0.15
APP-208ENST00000439274 RBL1P28749 1068 aa16■□□□□ 0.15
APP-208ENST00000439274 GCKP35557 465 aa16■□□□□ 0.15
APP-208ENST00000439274 PSEN1P49768 467 aa16■□□□□ 0.15
APP-208ENST00000439274 TUBP50607 506 aa16■□□□□ 0.15
APP-208ENST00000439274 CLCN3P51790 818 aa16■□□□□ 0.15
APP-208ENST00000439274 ZNF143P52747 638 aaPredicted RBP16■□□□□ 0.15
APP-208ENST00000439274 CCDC6Q16204 474 aa16■□□□□ 0.15
APP-208ENST00000439274 MUM1Q2TAK8 710 aa16■□□□□ 0.15
APP-208ENST00000439274 HSF5Q4G112 596 aaPredicted RBP16■□□□□ 0.15
APP-208ENST00000439274 JADE1Q6IE81 842 aa16■□□□□ 0.15
APP-208ENST00000439274 OR6B2Q6IFH4 312 aa16■□□□□ 0.15
APP-208ENST00000439274 SCYL2Q6P3W7 929 aa16■□□□□ 0.15
APP-208ENST00000439274 METTL7BQ6UX53 244 aa16■□□□□ 0.15
APP-208ENST00000439274 SLC26A11Q86WA9 606 aa16■□□□□ 0.15
APP-208ENST00000439274 ARMC2Q8NEN0 867 aa16■□□□□ 0.15
APP-208ENST00000439274 CHST13Q8NET6 341 aa16■□□□□ 0.15
APP-208ENST00000439274 FBXO27Q8NI29 283 aa16■□□□□ 0.15
APP-208ENST00000439274 TRAF3IP1Q8TDR0 691 aaPredicted RBP16■□□□□ 0.15
APP-208ENST00000439274 ARHGEF4Q9NR80 690 aa16■□□□□ 0.15
APP-208ENST00000439274 ZC3H7BQ9UGR2 993 aaKnown RBP16■□□□□ 0.15
APP-208ENST00000439274 ACKR2O00590 384 aa15.99■□□□□ 0.15
APP-208ENST00000439274 ENDOD1O94919 500 aa15.99■□□□□ 0.15
APP-208ENST00000439274 HMGCRP04035 888 aa15.99■□□□□ 0.15
APP-208ENST00000439274 PEX19P40855 299 aa15.99■□□□□ 0.15
APP-208ENST00000439274 ERFP50548 548 aa15.99■□□□□ 0.15
APP-208ENST00000439274 MRPS5P82675 430 aaKnown RBP15.99■□□□□ 0.15
APP-208ENST00000439274 KRT81Q14533 505 aa15.99■□□□□ 0.15
APP-208ENST00000439274 TTC39BQ5VTQ0 682 aaPredicted RBP15.99■□□□□ 0.15
APP-208ENST00000439274 FAM183BPQ6ZVS7 135 aa15.99■□□□□ 0.15
APP-208ENST00000439274 CAND1Q86VP6 1230 aaKnown RBP15.99■□□□□ 0.15
APP-208ENST00000439274 CCDC33Q8N5R6 958 aa15.99■□□□□ 0.15
APP-208ENST00000439274 PLD5Q8N7P1 536 aa15.99■□□□□ 0.15
APP-208ENST00000439274 SH3TC2Q8TF17 1288 aa15.99■□□□□ 0.15
APP-208ENST00000439274 POPDC2Q9HBU9 364 aa15.99■□□□□ 0.15
APP-208ENST00000439274 MARCOQ9UEW3 520 aaPredicted RBP15.99■□□□□ 0.15
APP-208ENST00000439274 RPL26L1Q9UNX3 145 aaKnown RBP15.99■□□□□ 0.15
APP-208ENST00000439274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.99■□□□□ 0.15
APP-208ENST00000439274 CHADO15335 359 aa15.99■□□□□ 0.15
APP-208ENST00000439274 APRTP07741 180 aa15.99■□□□□ 0.15
APP-208ENST00000439274 KITP10721 976 aa15.99■□□□□ 0.15
APP-208ENST00000439274 IL4RP24394 825 aa15.99■□□□□ 0.15
APP-208ENST00000439274 GABRB2P47870 512 aa15.99■□□□□ 0.15
APP-208ENST00000439274 RGS7P49802 495 aa15.99■□□□□ 0.15
APP-208ENST00000439274 CCDC62Q6P9F0 684 aa15.99■□□□□ 0.15
APP-208ENST00000439274 NCAPG2Q86XI2 1143 aa15.99■□□□□ 0.15
APP-208ENST00000439274 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
APP-208ENST00000439274 RNF157Q96PX1 679 aa15.99■□□□□ 0.15
APP-208ENST00000439274 FZD8Q9H461 694 aa15.99■□□□□ 0.15
APP-208ENST00000439274 SBF1O95248 1867 aa15.98■□□□□ 0.15
APP-208ENST00000439274 DPPA5A6NC42 116 aa15.98■□□□□ 0.15
APP-208ENST00000439274 C2CD4BA6NLJ0 364 aa15.98■□□□□ 0.15
APP-208ENST00000439274 NVLO15381 856 aaKnown RBP15.98■□□□□ 0.15
APP-208ENST00000439274 PRPSAP2O60256 369 aa15.98■□□□□ 0.15
APP-208ENST00000439274 TOP3BO95985 862 aaKnown RBP15.98■□□□□ 0.15
APP-208ENST00000439274 LMNAP02545 664 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms