RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 KIF9Q9HAQ2 790 aa25.08■■□□□ 1.61
RBFOX2-209ENST00000438146 ST7Q9NRC1 585 aa25.08■■□□□ 1.61
RBFOX2-209ENST00000438146 ARHGAP26Q9UNA1 814 aa25.08■■□□□ 1.61
RBFOX2-209ENST00000438146 MYO16Q9Y6X6 1858 aa25.08■■□□□ 1.6
RBFOX2-209ENST00000438146 FAM170AA1A519 330 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 SCAMP3O14828 347 aaKnown RBP25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 TLR5O60602 858 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 OLFM2O95897 454 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 RARGP13631 454 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 TMEM31Q5JXX7 168 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 TTC8Q8TAM2 541 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 WNT16Q9UBV4 365 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 ANAPC1Q9H1A4 1944 aa25.07■■□□□ 1.6
RBFOX2-209ENST00000438146 KRBA1A5PL33 1030 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 MDM4O15151 490 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 CYP11B1P15538 503 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 PFKLP17858 780 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 KRT9P35527 623 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 SLC7A9P82251 487 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 PFKPQ01813 784 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 ZNF77Q15935 545 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 TAF3Q5VWG9 929 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 IRF7Q92985 503 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 PBXIP1Q96AQ6 731 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 MIS12Q9H081 205 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 ARHGEF3Q9NR81 526 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 THG1LQ9NWX6 298 aaKnown RBP25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 CYTH4Q9UIA0 394 aa25.06■■□□□ 1.6
RBFOX2-209ENST00000438146 LEFTY2O00292 366 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 TUBP50607 506 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 JAM2P57087 298 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 BPIFB4P59827 614 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 YWHAGP61981 247 aaKnown RBP eCLIP25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 TNK2Q07912 1038 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 MTF1Q14872 753 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 TRIM68Q6AZZ1 485 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 CC2D1AQ6P1N0 951 aaPredicted RBP25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 HFE2Q6ZVN8 426 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 BHLHA9Q7RTU4 235 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 CLEC4CQ8WTT0 213 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 PDCL3Q9H2J4 239 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 HEBP1Q9NRV9 189 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 GKN1Q9NS71 199 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 CHADO15335 359 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 GPR37L1O60883 481 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 IRF1P10914 325 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 SOX5P35711 763 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 USP4Q13107 963 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 NR1I3Q14994 352 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 ARHGAP29Q52LW3 1261 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 SLC44A4Q53GD3 710 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 C10orf120Q5SQS8 335 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 PM20D1Q6GTS8 502 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 CACNA2D4Q7Z3S7 1137 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 NOP9Q86U38 636 aaKnown RBP25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 HSFY1Q96LI6 401 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 MFSD1Q9H3U5 465 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 CYLDQ9NQC7 956 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 CFAP97Q9P2B7 532 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 PCDHGC3Q9UN70 934 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 WNT6Q9Y6F9 365 aa25.05■■□□□ 1.6
RBFOX2-209ENST00000438146 COL4A3Q01955 1670 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 TECTAO75443 2155 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 YJEFN3A6XGL0 299 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 E7ENQ6 273 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 STK25O00506 426 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 RALAP11233 206 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 STAT1P42224 750 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 UBASH3AP57075 661 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 DAOAP59103 153 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 ARID5AQ03989 594 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 SCUBE3Q8IX30 993 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 ARHGAP18Q8N392 663 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 WDTC1Q8N5D0 677 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 C1orf131Q8NDD1 294 aaKnown RBP25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 FLCNQ8NFG4 579 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 CSGALNACT1Q8TDX6 532 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 CNGB3Q9NQW8 809 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 GTSE1Q9NYZ3 720 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 TJP2Q9UDY2 1190 aa25.04■■□□□ 1.6
RBFOX2-209ENST00000438146 ARNTLO00327 626 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 ATP5C1P36542 298 aaKnown RBP25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 PSEN1P49768 467 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 ZNF445P59923 1031 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 PDCLQ13371 301 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 MLF2Q15773 248 aaPredicted RBP25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 MEA1Q16626 185 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 RSRC2Q7L4I2 434 aaKnown RBP25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 MIB1Q86YT6 1006 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 SLC20A1Q8WUM9 679 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 EDEM1Q92611 657 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 DNASE1L2Q92874 299 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 ZFRQ96KR1 1074 aaKnown RBP25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 LRFN3Q9BTN0 628 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 EBF3Q9H4W6 596 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 DUS2Q9NX74 493 aaKnown RBP25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 IFNKQ9P0W0 207 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 DAAM1Q9Y4D1 1078 aa25.03■■□□□ 1.6
RBFOX2-209ENST00000438146 PRR33A8MZF0 331 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms