RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 TTC8Q8TAM2 541 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 DCAKDQ8WVC6 231 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 TRIM56Q9BRZ2 755 aaKnown RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 B3GNT5Q9BYG0 378 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 TRIM6Q9C030 488 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 LRMDAQ9H2I8 198 aa17.42■□□□□ 0.38
TTC3-209ENST00000438055 BARX2Q9UMQ3 279 aaPredicted RBP17.42■□□□□ 0.38
TTC3-209ENST00000438055 LCP1P13796 627 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 CCDC15Q0P6D6 951 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 Q3C1V9 767 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 PRPF39Q86UA1 669 aaKnown RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 CMASQ8NFW8 434 aaPredicted RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 STMN2Q93045 179 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 SRPK1Q96SB4 655 aaKnown RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 MUM1Q2TAK8 710 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 POTEAQ6S8J7 498 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 CLNKQ7Z7G1 428 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 BANPQ8N9N5 519 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 DTX3LQ8TDB6 740 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 RNF157Q96PX1 679 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 MAGED2Q9UNF1 606 aaPredicted RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 FZD9O00144 591 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 MAGEB2O15479 319 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 ARF4P18085 180 aaPredicted RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 SERPINB4P48594 390 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 NOMO1Q15155 1222 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 SLC45A4Q5BKX6 768 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 L3MBTL3Q96JM7 780 aaPredicted RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 WDR83Q9BRX9 315 aaKnown RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 TXNRD2Q9NNW7 524 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 NKX1-2Q9UD57 310 aaPredicted RBP17.41■□□□□ 0.38
TTC3-209ENST00000438055 NR2E3Q9Y5X4 410 aa17.41■□□□□ 0.38
TTC3-209ENST00000438055 PDHA1P08559 390 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 IREB2P48200 963 aaKnown RBP17.4■□□□□ 0.38
TTC3-209ENST00000438055 PLEKHG4Q58EX7 1191 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 SLC26A11Q86WA9 606 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 ARID3BQ8IVW6 561 aaPredicted RBP17.4■□□□□ 0.38
TTC3-209ENST00000438055 PDCD7Q8N8D1 485 aaKnown RBP17.4■□□□□ 0.38
TTC3-209ENST00000438055 UTP4Q969X6 686 aaKnown RBP17.4■□□□□ 0.38
TTC3-209ENST00000438055 APOPT1Q96IL0 206 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 C2CD2LO14523 706 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 ABLIM1O14639 778 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 SNRPAP09012 282 aaKnown RBP17.4■□□□□ 0.38
TTC3-209ENST00000438055 PTPN4P29074 926 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 SLC10A6Q3KNW5 377 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 PLPPR4Q7Z2D5 763 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 NUDCD3Q8IVD9 361 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 DEPDC1BQ8WUY9 529 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 VPS11Q9H270 941 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 EBF2Q9HAK2 575 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 FAM237BA0A1B0GVD1 139 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 A8MXQ7 604 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 CA9Q16790 459 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 BOLA3Q53S33 107 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 NDUFAF2Q8N183 169 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 PLD5Q8N7P1 536 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 LPIN3Q9BQK8 851 aa17.4■□□□□ 0.38
TTC3-209ENST00000438055 ZBTB42B2RXF5 422 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 DDNO94850 711 aaPredicted RBP17.39■□□□□ 0.37
TTC3-209ENST00000438055 CCNYQ8ND76 341 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 MCRS1Q96EZ8 462 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 SNRNP25Q9BV90 132 aaKnown RBP17.39■□□□□ 0.37
TTC3-209ENST00000438055 CEP41Q9BYV8 373 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 CYP3A43Q9HB55 503 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 ARL8BQ9NVJ2 186 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 HES2Q9Y543 173 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 E2F8A0AVK6 867 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 CCDC22O60826 627 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 KRT38O76015 456 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 NEBLO76041 1014 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 ENO1P06733 434 aaKnown RBP17.39■□□□□ 0.37
TTC3-209ENST00000438055 SESN2P58004 480 aaPredicted RBP17.39■□□□□ 0.37
TTC3-209ENST00000438055 CHI3L2Q15782 390 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 KIZQ2M2Z5 673 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 PPP1R26Q5T8A7 1209 aaPredicted RBP17.39■□□□□ 0.37
TTC3-209ENST00000438055 TTC39BQ5VTQ0 682 aaPredicted RBP17.39■□□□□ 0.37
TTC3-209ENST00000438055 TTC7BQ86TV6 843 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 AFG1LQ8WV93 481 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 BCO2Q9BYV7 579 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 RNPEPL1Q9HAU8 725 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 C2CD4BA6NLJ0 364 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 SMAPO00193 183 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 UGT1A9O60656 530 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 EDNRBP24530 442 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 KDSRQ06136 332 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 PMF1Q6P1K2 205 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 NME8Q8N427 588 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 SLC44A1Q8WWI5 657 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 UGT1A7Q9HAW7 530 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 UGT1A10Q9HAW8 530 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 UGT1A8Q9HAW9 530 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 PTPRHQ9HD43 1115 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 TXNDC16Q9P2K2 825 aa17.39■□□□□ 0.37
TTC3-209ENST00000438055 ITGBL1O95965 494 aaPredicted RBP17.38■□□□□ 0.37
TTC3-209ENST00000438055 MCF2P10911 925 aa17.38■□□□□ 0.37
TTC3-209ENST00000438055 ATXN1P54253 815 aaKnown RBP17.38■□□□□ 0.37
TTC3-209ENST00000438055 INPP5DQ92835 1189 aa17.38■□□□□ 0.37
TTC3-209ENST00000438055 CYB561D2O14569 222 aa17.38■□□□□ 0.37
TTC3-209ENST00000438055 SLC25A27O95847 323 aa17.38■□□□□ 0.37
TTC3-209ENST00000438055 ALADP13716 330 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms