RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 PPM1AP35813 382 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 BMPR1AP36894 532 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CTSOP43234 321 aaPredicted RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 NSFP46459 744 aaKnown RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CACNA2D1P54289 1103 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 DSG1Q02413 1049 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 KIF5AQ12840 1032 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 TCEAL1Q15170 157 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 USP41Q3LFD5 358 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 PTPN20Q4JDL3 420 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF280DQ6N043 979 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 PMF1Q6P1K2 205 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 LLGL2Q6P1M3 1020 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ANKS3Q6ZW76 656 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 LYSMD3Q7Z3D4 306 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 SPRED2Q7Z698 418 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 PHLDB2Q86SQ0 1253 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 FAM35AQ86V20 835 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 KLHL23Q8NBE8 558 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ZMIZ2Q8NF64 920 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 RNF217Q8TC41 542 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 RIN2Q8WYP3 895 aaPredicted RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 HPS1Q92902 700 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 TMEM169Q96HH4 297 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 VCPIP1Q96JH7 1222 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CPXM1Q96SM3 734 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 SMOQ99835 787 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 C11orf70Q9BRQ4 267 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 MED10Q9BTT4 135 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 DUSP16Q9BY84 665 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 RHOBTB2Q9BYZ6 727 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 LUC7LQ9NQ29 371 aaKnown RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 TMEM30AQ9NV96 361 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ADAM22Q9P0K1 906 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 HESX1Q9UBX0 185 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 TJP2Q9UDY2 1190 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CHORDC1Q9UHD1 332 aaPredicted RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 COG5Q9UP83 839 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 YBX2Q9Y2T7 364 aaKnown RBP7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 CEP83Q9Y592 693 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 PAXBP1Q9Y5B6 917 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 BACE2Q9Y5Z0 518 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 ATP8B3O60423 1300 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 TET1Q8NFU7 2136 aa7.42□□□□□ -1.22
LSM3P3-201ENST00000436601 TTC3P53804 2025 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 GOLGA6L9A6NEM1 432 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 HHLA1C9JL84 531 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 MOCS3O95396 460 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 VNN2O95498 520 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 CA3P07451 260 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 SETSIPP0DME0 302 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 RPL17P18621 184 aaKnown RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 BDNFP23560 247 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 GABRB2P47870 512 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 RPL34P49207 117 aaKnown RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 GLUD2P49448 558 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 RGS19P49795 217 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 RGS7P49802 495 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 BCAT1P54687 386 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 GPC5P78333 572 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 TSPY1Q01534 308 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 KRT17Q04695 432 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 BST2Q10589 180 aaKnown RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 POU4F2Q12837 409 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 GPR17Q13304 367 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 PDCLQ13371 301 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 MAPRE1Q15691 268 aaKnown RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 SLC39A12Q504Y0 691 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 ARHGAP29Q52LW3 1261 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 CYP4A22Q5TCH4 519 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 SLC8B1Q6J4K2 584 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 KIAA1841Q6NSI8 718 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 PPP1R2P3Q6NXS1 205 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 CLEC20AQ6ZU45 233 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 TMEM110Q86TL2 294 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 PIGZQ86VD9 579 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 ERICH1Q86X53 443 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 DCP1BQ8IZD4 617 aaKnown RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 VPS52Q8N1B4 723 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 SLC35G2Q8TBE7 412 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 AUTS2Q8WXX7 1259 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 ZNF653Q96CK0 615 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 KCNK16Q96T55 309 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 CLSTN3Q9BQT9 956 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 C17orf80Q9BSJ5 609 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 OXCT2Q9BYC2 517 aaPredicted RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 UBXN6Q9BZV1 441 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 TSGA10Q9BZW7 698 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 ZBP1Q9H171 429 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 CSNK1G1Q9HCP0 422 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 KRT82Q9NSB4 513 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 MYO1AQ9UBC5 1043 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 MTRRQ9UBK8 725 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 FAM8A1Q9UBU6 413 aa7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 CNOT8Q9UFF9 292 aaKnown RBP7.41□□□□□ -1.22
LSM3P3-201ENST00000436601 FOXD3Q9UJU5 478 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms