RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 GRIA2P42262 883 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 PIK3CAP42336 1068 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 PGFP49763 221 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 ELF2Q15723 593 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 CRY1Q16526 586 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 AASDHQ4L235 1098 aaPredicted RBP17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 USP39Q53GS9 565 aaKnown RBP17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 INTS8Q75QN2 995 aaKnown RBP17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 RASSF3Q86WH2 238 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 C12orf40Q86WS4 652 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 SFTPA1Q8IWL2 248 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 GUF1Q8N442 669 aaKnown RBP17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 HNRNPABQ99729 332 aaKnown RBP17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 DUSP9Q99956 384 aaKnown RBP17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 SCAND2PQ9GZW5 306 aaPredicted RBP17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 VPS45Q9NRW7 570 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 RXFP3Q9NSD7 469 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 FAM49BQ9NUQ9 324 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 SH3BP1Q9Y3L3 701 aa17.11■□□□□ 0.33
AC055876.3-201ENST00000431496 CHRM1P11229 460 aaPredicted RBP17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 MPLP40238 635 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 TNFRSF4P43489 277 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 GCLMP48507 274 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 MCCD1P59942 119 aaPredicted RBP17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 GAD2Q05329 585 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 ENPEPQ07075 957 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 PPP3CAQ08209 521 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 INCA1Q0VD86 236 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 ADAM9Q13443 819 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 PPM1JQ5JR12 505 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 EMC10Q5UCC4 262 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 BBS7Q8IWZ6 715 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 ALLCQ8N6M5 410 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 IL17RCQ8NAC3 791 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 TAS1R2Q8TE23 839 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 WBP2Q969T9 261 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 TWNKQ96RR1 684 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 NACA2Q9H009 215 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 SMOC1Q9H4F8 434 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 APOBEC3GQ9HC16 384 aaKnown RBP17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 ARHGEF4Q9NR80 690 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 INVSQ9Y283 1065 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 ATP6V1DQ9Y5K8 247 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 KIAA1549LQ6ZVL6 1849 aa17.1■□□□□ 0.33
AC055876.3-201ENST00000431496 MYH10P35580 1976 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TM4SF5O14894 197 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TLR5O60602 858 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 ZNF202O95125 648 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 KLF8O95600 359 aaPredicted RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 FAM200BP0CF97 657 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TRIM49P0CI25 452 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TRIM49CP0CI26 452 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 KRT13P13646 458 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 HNRNPLP14866 589 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TRIM21P19474 475 aaKnown RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 ADORA2BP29275 332 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 PSMC2P35998 433 aaKnown RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 KIR2DL1P43626 348 aaPredicted RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 HSF5Q4G112 596 aaPredicted RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 IL31Q6EBC2 164 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 ANO7Q6IWH7 933 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TMEM92Q6UXU6 159 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 CLEC20AQ6ZU45 233 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 HTR3DQ70Z44 454 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TMEM25Q86YD3 366 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 FAM186BQ8IYM0 893 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 PHTF2Q8N3S3 785 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TXNDC5Q8NBS9 432 aaKnown RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 DDX1Q92499 740 aaKnown RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 NT5C1AQ9BXI3 368 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TPSD1Q9BZJ3 242 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 IMPG2Q9BZV3 1241 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 GOLPH3LQ9H4A5 285 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 TLR8Q9NR97 1041 aaKnown RBP17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 SPHK2Q9NRA0 654 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 SCML2Q9UQR0 700 aa17.09■□□□□ 0.33
AC055876.3-201ENST00000431496 BCLAF3A2AJT9 711 aaKnown RBP17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 HHLA1C9JL84 531 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 SGK1O00141 431 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 HOXC11O43248 304 aaPredicted RBP17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 TBX18O95935 607 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 ADRB1P08588 477 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 GBP1P32455 592 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 TIE1P35590 1138 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 CREB5Q02930 508 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 KDSRQ06136 332 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 STPG1Q5TH74 334 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 BTBD8Q5XKL5 378 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 GPRIN1Q7Z2K8 1008 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 ETFBKMTQ8IXQ9 262 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 NAT16Q8N8M0 369 aa17.08■□□□□ 0.32
AC055876.3-201ENST00000431496 MDGA1Q8NFP4 955 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms