RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 TMEM191BP0C7N4 346 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 PDK1Q15118 436 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 ATG14Q6ZNE5 492 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 ZBTB8BQ8NAP8 495 aaPredicted RBP17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 CSRNP1Q96S65 589 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 SIKE1Q9BRV8 207 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 WDR11Q9BZH6 1224 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 SMYD2Q9NRG4 433 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 TBX20Q9UMR3 447 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 STRNO43815 780 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 MSX2P35548 267 aaPredicted RBP17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 PPIDQ08752 370 aaKnown RBP17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 SPP2Q13103 211 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 STX3Q13277 289 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 TBCCQ15814 346 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 TTC39BQ5VTQ0 682 aaPredicted RBP17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 CC2D2BQ6DHV5 1058 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 B3GNT9Q6UX72 402 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 FRMD7Q6ZUT3 714 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 MAVSQ7Z434 540 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 SLC26A11Q86WA9 606 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 TFB1MQ8WVM0 346 aaKnown RBP17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 TIMMDC1Q9NPL8 285 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 PRR12Q9ULL5 1215 aa17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 MYH9P35579 1960 aaKnown RBP17.03■□□□□ 0.32
RHBDF1-204ENST00000428730 C1QAP02745 245 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 ACO1P21399 889 aaKnown RBP17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 JAG1P78504 1218 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 C16orf46Q6P387 395 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 DCUN1D2Q6PH85 259 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 C15orf52Q6ZUT6 534 aaKnown RBP17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 ANO5Q75V66 913 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 PTF1AQ7RTS3 328 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 KBTBD6Q86V97 674 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 ZNF410Q86VK4 478 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 ZNF677Q86XU0 584 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 PHTF2Q8N3S3 785 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 ACTRT2Q8TDY3 377 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 JADE3Q92613 823 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 MRPS26Q9BYN8 205 aaKnown RBP17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 APOBEC3GQ9HC16 384 aaKnown RBP17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 INIPQ9NRY2 104 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 NYAP2Q9P242 653 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 SH3GLB1Q9Y371 365 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 TTLL3Q9Y4R7 772 aa17.02■□□□□ 0.32
RHBDF1-204ENST00000428730 TMEM221A6NGB7 291 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 DDTLA6NHG4 134 aaPredicted RBP17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 GNPATO15228 680 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 DENRO43583 198 aaKnown RBP17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 STT3AP46977 705 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 ATXN3P54252 364 aaPredicted RBP17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 CDKL1Q00532 357 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 KRT81Q14533 505 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 LPIN1Q14693 890 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 UGCGQ16739 394 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 PPP6R3Q5H9R7 873 aaPredicted RBP17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 TATDN1Q6P1N9 297 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 PHF13Q86YI8 300 aaPredicted RBP17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 TMEM174Q8WUU8 243 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 TMIGD2Q96BF3 282 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 MFSD14AQ96MC6 490 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 TEX264Q9Y6I9 313 aa17.02■□□□□ 0.31
RHBDF1-204ENST00000428730 DKC1O60832 514 aaKnown RBP eCLIP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 BPGMP07738 259 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 EIF4BP23588 611 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 WASHC5Q12768 1159 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 CYP4A22Q5TCH4 519 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 MROH9Q5TGP6 573 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 NDUFAF2Q8N183 169 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 PQLC1Q8N2U9 271 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 GALNT4Q8N4A0 578 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 PPP1R14CQ8TAE6 165 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 H0YIN7 160 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 HLA-DRAP01903 254 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 SNRPAP09012 282 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 MAPTP10636 758 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 NELFEP18615 380 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 CDH2P19022 906 aaPredicted RBP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 IL1R2P27930 398 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 RPL10AP62906 217 aaKnown RBP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 FAXCQ5TGI0 409 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 RNF168Q8IYW5 571 aaPredicted RBP17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 TMEM161BQ8NDZ6 487 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 FNDC8Q8TC99 324 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 CEPT1Q9Y6K0 416 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 PTPRJQ12913 1337 aa17.01■□□□□ 0.31
RHBDF1-204ENST00000428730 ITGB5P18084 799 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 NCF2P19878 526 aaPredicted RBP17■□□□□ 0.31
RHBDF1-204ENST00000428730 MTA1Q13330 715 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 ENOSF1Q7L5Y1 443 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 NUP93Q8N1F7 819 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 BSNDQ8WZ55 320 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 IRGQQ8WZA9 623 aa17■□□□□ 0.31
RHBDF1-204ENST00000428730 ZFRQ96KR1 1074 aaKnown RBP17■□□□□ 0.31
RHBDF1-204ENST00000428730 CCDC17Q96LX7 622 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms