RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PDXDC1Q6P996 788 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 C1orf228Q6PIY5 440 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 NELFCDQ8IXH7 590 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 C12orf56Q8IXR9 622 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 TXLNBQ8N3L3 684 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CHCHD4Q8N4Q1 142 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CEP112Q8N8E3 955 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ACRBPQ8NEB7 543 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 LNX1Q8TBB1 728 aaPredicted RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 BICD1Q96G01 975 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 EEF2KMTQ96G04 330 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 MSANTD3Q96H12 275 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ZC3H10Q96K80 434 aaKnown RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CCDC42Q96M95 316 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 UROC1Q96N76 676 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CLSTN3Q9BQT9 956 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 TSGA10Q9BZW7 698 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CCDC86Q9H6F5 360 aaKnown RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 MMRN2Q9H8L6 949 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 LZTFL1Q9NQ48 299 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 TBC1D7Q9P0N9 293 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ARMCX3Q9UH62 379 aaPredicted RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CDC23Q9UJX2 597 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 SDK1Q7Z5N4 2213 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 NOTCH4Q99466 2003 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 SCN1AP35498 2009 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 BCLAF3A2AJT9 711 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 CTAGE9A4FU28 777 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 PODXLO00592 558 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 KHNYNO15037 678 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 MAPK13O15264 365 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 OGTO15294 1046 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 EXTL3O43909 919 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 TADA3O75528 432 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 AP1G2O75843 785 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 B3GAT3O94766 335 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 PRPF6O94906 941 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 GCNT3O95395 438 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 NR3C1P04150 777 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 RHOP08100 348 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 CLTAP09496 248 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 PSMC3P17980 439 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 ANXA13P27216 316 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 TKTP29401 623 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 PSMC2P35998 433 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 VAV2P52735 878 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 ZBTB6Q15916 424 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 PSMD5Q16401 504 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 SLC5A9Q2M3M2 681 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 FAM78AQ5JUQ0 283 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 ZNF569Q5MCW4 686 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 PAPD7Q5XG87 772 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 RSRC2Q7L4I2 434 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 ZNF605Q86T29 641 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 CSGALNACT1Q8TDX6 532 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 DEPDC1BQ8WUY9 529 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 UBXN4Q92575 508 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 HVCN1Q96D96 273 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 NAPGQ99747 312 aaPredicted RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 TTPALQ9BTX7 342 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 DUSP15Q9H1R2 295 aaPredicted RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 TMEM206Q9H813 350 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 SLC38A7Q9NVC3 462 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 ARHGAP20Q9P2F6 1191 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 MTRRQ9UBK8 725 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 CPSF3Q9UKF6 684 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 RAI2Q9Y5P3 530 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 BZW2Q9Y6E2 419 aaKnown RBP9.23□□□□□ -0.93
HDAC1-202ENST00000428704 STYXL1Q9Y6J8 313 aa9.23□□□□□ -0.93
HDAC1-202ENST00000428704 ANO9A1A5B4 782 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 FAM221BA6H8Z2 402 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 LRRC53A6NM62 1247 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 LACTBL1A8MY62 500 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 CDX4O14627 284 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 PPEF2O14830 753 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 EPHB6O15197 1021 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 AFPP02771 609 aaKnown RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 SERPING1P05155 500 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 EPB41P11171 864 aaKnown RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 H2AFXP16104 143 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 PRLRP16471 622 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 ADSSP30520 456 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 SLC19A1P41440 591 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 SOX9P48436 509 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 RPIAP49247 311 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 GUCY2FP51841 1108 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 WNT7BP56706 349 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 AMPD2Q01433 879 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 ELAVL2Q12926 359 aaKnown RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 SPA17Q15506 151 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 WHAMMP3Q1A5X7 153 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 HGSNATQ68CP4 663 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 CRELD2Q6UXH1 353 aaPredicted RBP9.22□□□□□ -0.93
HDAC1-202ENST00000428704 VITQ6UXI7 678 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 LIAT1Q6ZQX7 453 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 CEP57Q86XR8 500 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 SLC35F6Q8N357 371 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 ZSWIM2Q8NEG5 633 aa9.22□□□□□ -0.93
HDAC1-202ENST00000428704 MNS1Q8NEH6 495 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms