RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CHRNB2P17787 502 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 CASP14P31944 242 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 ATP5C1P36542 298 aaKnown RBP15.29■□□□□ 0.04
SGCE-204ENST00000428696 KLHL30Q0D2K2 578 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 PDCLQ13371 301 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 TDGQ13569 410 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 HTR4Q13639 388 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 RAB41Q5JT25 222 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 OR6B2Q6IFH4 312 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 CCDC186Q7Z3E2 898 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 SCD5Q86SK9 330 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 PHLDB2Q86SQ0 1253 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 ERICH1Q86X53 443 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 CELF5Q8N6W0 485 aaKnown RBP15.29■□□□□ 0.04
SGCE-204ENST00000428696 CLEC4CQ8WTT0 213 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 DDX1Q92499 740 aaKnown RBP15.29■□□□□ 0.04
SGCE-204ENST00000428696 AGPAT1Q99943 283 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 EDEM3Q9BZQ6 932 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 SMOC2Q9H3U7 446 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 OSER1Q9NX31 292 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 NOCTQ9UK39 431 aaKnown RBP15.29■□□□□ 0.04
SGCE-204ENST00000428696 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 CCL26Q9Y258 94 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 USP3Q9Y6I4 520 aa15.29■□□□□ 0.04
SGCE-204ENST00000428696 YJEFN3A6XGL0 299 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 E7ENQ6 273 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 ANHXE9PGG2 379 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 SCAMP3O14828 347 aaKnown RBP15.28■□□□□ 0.04
SGCE-204ENST00000428696 MDM4O15151 490 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 RNASE9P60153 205 aaKnown RBP15.28■□□□□ 0.04
SGCE-204ENST00000428696 ZBED6P86452 979 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 BSPRYQ5W0U4 402 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 CC2D1AQ6P1N0 951 aaPredicted RBP15.28■□□□□ 0.04
SGCE-204ENST00000428696 IRF2BP2Q7Z5L9 587 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 ZNF677Q86XU0 584 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 MIB1Q86YT6 1006 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 VSTM4Q8IW00 320 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 SLC30A5Q8TAD4 765 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 IPO4Q8TEX9 1081 aaKnown RBP15.28■□□□□ 0.04
SGCE-204ENST00000428696 STK32AQ8WU08 396 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 USP13Q92995 863 aaPredicted RBP15.28■□□□□ 0.04
SGCE-204ENST00000428696 NXPE3Q969Y0 559 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 ELSPBP1Q96BH3 223 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 CPXM1Q96SM3 734 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.28■□□□□ 0.04
SGCE-204ENST00000428696 TRMT61BQ9BVS5 477 aaKnown RBP15.28■□□□□ 0.04
SGCE-204ENST00000428696 SLC4A5Q9BY07 1137 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 CNGB3Q9NQW8 809 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 GKN1Q9NS71 199 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 THG1LQ9NWX6 298 aaKnown RBP15.28■□□□□ 0.04
SGCE-204ENST00000428696 TJP2Q9UDY2 1190 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 ZMYM5Q9UJ78 669 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 MYO6Q9UM54 1294 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 CPQQ9Y646 472 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 NOTCH4Q99466 2003 aa15.28■□□□□ 0.04
SGCE-204ENST00000428696 A0A1W2PQJ5 194 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 FAM92AA1XBS5 289 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 TMCO5BA8MYB1 307 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 CAPN9O14815 690 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 ZNF263O14978 683 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 NARSO43776 548 aaKnown RBP15.27■□□□□ 0.04
SGCE-204ENST00000428696 ECI2O75521 394 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 FBXO21O94952 628 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 GYPCP04921 128 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 HMBSP08397 361 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 GDI1P31150 447 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 PSEN1P49768 467 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 ZNF75DP51815 510 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 DAOAP59103 153 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 GPC5P78333 572 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 FMO1Q01740 532 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 EFEMP1Q12805 493 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 C2CD6Q53TS8 623 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.04
SGCE-204ENST00000428696 FIGNQ5HY92 759 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 SMYD5Q6GMV2 418 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 PM20D1Q6GTS8 502 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 SARM1Q6SZW1 724 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 VITQ6UXI7 678 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 TADA2BQ86TJ2 420 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 MSANTD4Q8NCY6 345 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 TTC8Q8TAM2 541 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 SH3RF2Q8TEC5 729 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 IQCDQ96DY2 449 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 NUCKS1Q9H1E3 243 aaKnown RBP15.27■□□□□ 0.04
SGCE-204ENST00000428696 HAUS4Q9H6D7 363 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 BRD9Q9H8M2 597 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 RASAL2Q9UJF2 1139 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 FBXL21Q9UKT6 434 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 SORCS3Q9UPU3 1222 aa15.27■□□□□ 0.04
SGCE-204ENST00000428696 PTPRDP23468 1912 aa15.27■□□□□ 0.03
SGCE-204ENST00000428696 ITIH6Q6UXX5 1313 aa15.27■□□□□ 0.03
SGCE-204ENST00000428696 GOLGA8SH3BPF8 625 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 GRAP2O75791 330 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 LSM8O95777 96 aaKnown RBP15.26■□□□□ 0.03
SGCE-204ENST00000428696 ERBB2P04626 1255 aa15.26■□□□□ 0.03
SGCE-204ENST00000428696 PSMC3P17980 439 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms