RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 CLDN5O00501 218 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 TADA3O75528 432 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 ASS1P00966 412 aaKnown RBP13.5□□□□□ -0.25
SGCE-203ENST00000425444 GBP1P32455 592 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 PRCPP42785 496 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 NOP14P78316 857 aaKnown RBP13.5□□□□□ -0.25
SGCE-203ENST00000425444 IFRD2Q12894 506 aaPredicted RBP13.5□□□□□ -0.25
SGCE-203ENST00000425444 STIM1Q13586 685 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 ZCWPW2Q504Y3 356 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 C1orf220Q5T0J3 134 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 SPOPLQ6IQ16 392 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 CC2D1AQ6P1N0 951 aaPredicted RBP13.5□□□□□ -0.25
SGCE-203ENST00000425444 MON1AQ86VX9 555 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 CAMKK1Q8N5S9 505 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 ADAM32Q8TC27 787 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 TAS1R2Q8TE23 839 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 C8orf48Q96LL4 319 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 MYRFLQ96LU7 910 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 CEP295NLQ96MC4 621 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 LRRC3BQ96PB8 259 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 GTPBP4Q9BZE4 634 aaKnown RBP13.5□□□□□ -0.25
SGCE-203ENST00000425444 TDP1Q9NUW8 608 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 CCL26Q9Y258 94 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 PCDHA5Q9Y5H7 936 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 THADAQ6YHU6 1953 aa13.5□□□□□ -0.25
SGCE-203ENST00000425444 KIF26AQ9ULI4 1882 aaPredicted RBP13.49□□□□□ -0.25
SGCE-203ENST00000425444 TRAV19A0A0A6YYK7 116 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 PATE3B3GLJ2 98 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 CAPNS1P04632 268 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 USP17L7P0C7H9 530 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 RDXP35241 583 aaKnown RBP13.49□□□□□ -0.25
SGCE-203ENST00000425444 MXI1P50539 228 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 ENPEPQ07075 957 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 TNK2Q07912 1038 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 ORC1Q13415 861 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 DCAF17Q5H9S7 520 aaPredicted RBP13.49□□□□□ -0.25
SGCE-203ENST00000425444 TCERG1LQ5VWI1 586 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 KRT39Q6A163 491 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 FAM35AQ86V20 835 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 USP13Q92995 863 aaPredicted RBP13.49□□□□□ -0.25
SGCE-203ENST00000425444 B3GNT5Q9BYG0 378 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 SDCBP2Q9H190 292 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 TMEM8AQ9HCN3 771 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 TRPM5Q9NZQ8 1165 aa13.49□□□□□ -0.25
SGCE-203ENST00000425444 H0Y626 953 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 PSMA7O14818 248 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 SLC16A3O15427 465 aaKnown RBP13.48□□□□□ -0.25
SGCE-203ENST00000425444 STX10O60499 249 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 TRIM16O95361 564 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 ABL1P00519 1130 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 GTF2H1P32780 548 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 ASPAP45381 313 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 PDE6CP51160 858 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 NDST1P52848 882 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 CACNA2D1P54289 1103 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 USP46P62068 366 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 IRX4P78413 519 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 SCAPQ12770 1279 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 GRSF1Q12849 480 aaKnown RBP eCLIP13.48□□□□□ -0.25
SGCE-203ENST00000425444 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 ISM2Q6H9L7 571 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 UNC93AQ86WB7 457 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 CHCHD4Q8N4Q1 142 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 SPATA20Q8TB22 786 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 HNRNPLLQ8WVV9 542 aaKnown RBP13.48□□□□□ -0.25
SGCE-203ENST00000425444 SMARCD1Q96GM5 515 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 NIF3L1Q9GZT8 377 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 DMAP1Q9NPF5 467 aaPredicted RBP13.48□□□□□ -0.25
SGCE-203ENST00000425444 KRT82Q9NSB4 513 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 INVSQ9Y283 1065 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 OBSL1O75147 1896 aa13.48□□□□□ -0.25
SGCE-203ENST00000425444 C2orf78A6NCI8 922 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 TRIM49BA6NDI0 452 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 GADD45BO75293 160 aaPredicted RBP13.47□□□□□ -0.25
SGCE-203ENST00000425444 AP1G2O75843 785 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 CCDC130P13994 396 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 CD58P19256 250 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 MAPK8P45983 427 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 FKBP3Q00688 224 aaKnown RBP13.47□□□□□ -0.25
SGCE-203ENST00000425444 ZNF268Q14587 947 aaPredicted RBP13.47□□□□□ -0.25
SGCE-203ENST00000425444 MTF1Q14872 753 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 ITPRIPL2Q3MIP1 535 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 ANKRD40Q6AI12 368 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 TRIM68Q6AZZ1 485 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 CYP2U1Q7Z449 544 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 NUP93Q8N1F7 819 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 ARL14EPQ8N8R7 260 aaPredicted RBP13.47□□□□□ -0.25
SGCE-203ENST00000425444 SLC2A14Q8TDB8 520 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 LRIG1Q96JA1 1093 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 SLITRK1Q96PX8 696 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 SLC22A12Q96S37 553 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 CYP2S1Q96SQ9 504 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 TTLL2Q9BWV7 592 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 APOBEC3GQ9HC16 384 aaKnown RBP13.47□□□□□ -0.25
SGCE-203ENST00000425444 GKN1Q9NS71 199 aa13.47□□□□□ -0.25
SGCE-203ENST00000425444 FAM49BQ9NUQ9 324 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms