RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ATF2P15336 505 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 MATKP42679 507 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 TKTL1P51854 596 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 OTUD4Q01804 1114 aaKnown RBP27.69■■■□□ 2.02
LDB1-202ENST00000425280 OVOS1Q6IE37 1185 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 COLGALT2Q8IYK4 626 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 ALLCQ8N6M5 410 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 TTC13Q8NBP0 860 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 ACTL9Q8TC94 416 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 UBLCP1Q8WVY7 318 aaPredicted RBP27.69■■■□□ 2.02
LDB1-202ENST00000425280 PKMYT1Q99640 499 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 TBC1D13Q9NVG8 400 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 TMEM161AQ9NX61 479 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 VPS18Q9P253 973 aa27.69■■■□□ 2.02
LDB1-202ENST00000425280 DAB1O75553 588 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 ADCY8P40145 1251 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 VPS41P49754 854 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 ZC3H12AQ5D1E8 599 aaKnown RBP27.68■■■□□ 2.02
LDB1-202ENST00000425280 PRUNE1Q86TP1 453 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 DEFB106AQ8N104 65 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 CCDC89Q8N998 374 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 FAM149B1Q96BN6 582 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 SMARCD1Q96GM5 515 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 RHOBTB2Q9BYZ6 727 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 FRMD8P1Q9BZ68 369 aaPredicted RBP27.68■■■□□ 2.02
LDB1-202ENST00000425280 RNF208Q9H0X6 261 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 PITPNM1O00562 1244 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 ENPP3O14638 875 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 ITGAVP06756 1048 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 TYMPP19971 482 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 ATXN1P54253 815 aaKnown RBP27.68■■■□□ 2.02
LDB1-202ENST00000425280 KRT81Q14533 505 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 PDK2Q15119 407 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 OR10T2Q8NGX3 314 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 KANSL3Q9P2N6 904 aa27.68■■■□□ 2.02
LDB1-202ENST00000425280 MDM4O15151 490 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 COL6A1P12109 1028 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 YWHAZP63104 245 aaKnown RBP27.67■■■□□ 2.02
LDB1-202ENST00000425280 CA9Q16790 459 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 RHBDF2Q6PJF5 856 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 GPRIN1Q7Z2K8 1008 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 TMEM209Q96SK2 561 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 BEGAINQ9BUH8 593 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 PCDH18Q9HCL0 1135 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 TMLHEQ9NVH6 421 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 PCDHB8Q9UN66 801 aa27.67■■■□□ 2.02
LDB1-202ENST00000425280 ARHGEF37A1IGU5 675 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 HHLA1C9JL84 531 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 H0YGN5 161 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 PQBP1O60828 265 aaKnown RBP27.66■■■□□ 2.02
LDB1-202ENST00000425280 GYS2P54840 703 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 GABPB1Q06547 395 aaPredicted RBP27.66■■■□□ 2.02
LDB1-202ENST00000425280 RAB41Q5JT25 222 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 SPDYCQ5MJ68 293 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 LRIG3Q6UXM1 1119 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 MAP7D3Q8IWC1 876 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 GLIS1Q8NBF1 620 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 MAK16Q9BXY0 300 aaKnown RBP27.66■■■□□ 2.02
LDB1-202ENST00000425280 ULBP1Q9BZM6 244 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 CALCOCO1Q9P1Z2 691 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 NFS1Q9Y697 457 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 APOC4-APOC2K7ER74 178 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 FBXO21O94952 628 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 APOC2P02655 101 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 IL4RP24394 825 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 ITGA8P53708 1063 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 SLC25A52Q3SY17 297 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 STRADAQ7RTN6 431 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 LRRTM3Q86VH5 581 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 THEM5Q8N1Q8 247 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 GOLGA6L1Q8N7Z2 621 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 ELAC1Q9H777 363 aaKnown RBP27.66■■■□□ 2.02
LDB1-202ENST00000425280 CSNK1G1Q9HCP0 422 aa27.66■■■□□ 2.02
LDB1-202ENST00000425280 NRP1O14786 923 aa27.65■■■□□ 2.02
LDB1-202ENST00000425280 PECAM1P16284 738 aaPredicted RBP27.65■■■□□ 2.02
LDB1-202ENST00000425280 PMS2P54278 862 aa27.65■■■□□ 2.02
LDB1-202ENST00000425280 RNASELQ05823 741 aaKnown RBP27.65■■■□□ 2.02
LDB1-202ENST00000425280 ERMARDQ5T6L9 678 aa27.65■■■□□ 2.02
LDB1-202ENST00000425280 RNF157Q96PX1 679 aa27.65■■■□□ 2.02
LDB1-202ENST00000425280 TMEM121Q9BTD3 319 aa27.65■■■□□ 2.02
LDB1-202ENST00000425280 DNAJB4Q9UDY4 337 aa27.65■■■□□ 2.02
LDB1-202ENST00000425280 TMEM189-UBE2V1I3L0A0 370 aa27.64■■■□□ 2.02
LDB1-202ENST00000425280 SULT1E1P49888 294 aa27.64■■■□□ 2.02
LDB1-202ENST00000425280 TCTN1Q2MV58 587 aa27.64■■■□□ 2.02
LDB1-202ENST00000425280 DCAF6Q58WW2 860 aa27.64■■■□□ 2.02
LDB1-202ENST00000425280 HFE2Q6ZVN8 426 aa27.64■■■□□ 2.02
LDB1-202ENST00000425280 SEPT8Q92599 483 aa27.64■■■□□ 2.02
LDB1-202ENST00000425280 SLC2A13Q96QE2 648 aa27.64■■■□□ 2.02
LDB1-202ENST00000425280 NOS2P35228 1153 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 OR1G1P47890 313 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 DAOAP59103 153 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 TFDP2Q14188 446 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 OTUD1Q5VV17 481 aaPredicted RBP27.64■■■□□ 2.01
LDB1-202ENST00000425280 CCHCR1Q8TD31 782 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 NT5C3BQ969T7 300 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 ARL8AQ96BM9 186 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 EPB41L4BQ9H329 900 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 CNGB3Q9NQW8 809 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 ANAPC5Q9UJX4 755 aa27.64■■■□□ 2.01
LDB1-202ENST00000425280 GOLGA8KD6RF30 607 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms