RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 SIGLEC14Q08ET2 396 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 HECTD3Q5T447 861 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 KLHDC10Q6PID8 442 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 EPS8L1Q8TE68 723 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 ZFRQ96KR1 1074 aaKnown RBP19.42■□□□□ 0.7
HDAC6-205ENST00000423941 ULBP1Q9BZM6 244 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 EDEM3Q9BZQ6 932 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 SMG9Q9H0W8 520 aaKnown RBP19.42■□□□□ 0.7
HDAC6-205ENST00000423941 LRRC4Q9HBW1 653 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.42■□□□□ 0.7
HDAC6-205ENST00000423941 WNT16Q9UBV4 365 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 NOCTQ9UK39 431 aaKnown RBP19.42■□□□□ 0.7
HDAC6-205ENST00000423941 A0A1W2PQH9 124 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 STAT1P42224 750 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 ADIGQ0VDE8 80 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 USP4Q13107 963 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 ZNF77Q15935 545 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 TRIM67Q6ZTA4 783 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 NOP9Q86U38 636 aaKnown RBP19.41■□□□□ 0.7
HDAC6-205ENST00000423941 GPIHBP1Q8IV16 184 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 BPIFB1Q8TDL5 484 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 IRGQQ8WZA9 623 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 PCMTD1Q96MG8 357 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-205ENST00000423941 TRMT61BQ9BVS5 477 aaKnown RBP19.41■□□□□ 0.7
HDAC6-205ENST00000423941 CCSER2Q9H7U1 834 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 TRPC7Q9HCX4 862 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 C11orf16Q9NQ32 467 aa19.41■□□□□ 0.7
HDAC6-205ENST00000423941 CHADO15335 359 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 TLR5O60602 858 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 GFPT2O94808 682 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 CKMP06732 381 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 KRT9P35527 623 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 ACADSBP45954 432 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 DAOAP59103 153 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 BMP8AQ7Z5Y6 402 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 ZNF677Q86XU0 584 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 ARHGAP18Q8N392 663 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 SPAG5Q96R06 1193 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 FAM83CQ9BQN1 747 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 IFNKQ9P0W0 207 aa19.4■□□□□ 0.7
HDAC6-205ENST00000423941 DPYSL4O14531 572 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 FBXO21O94952 628 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 ABL1P00519 1130 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 RGS7P49802 495 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 GRM2Q14416 872 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 ARHGAP29Q52LW3 1261 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 IRF2BP2Q7Z5L9 587 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 NDRG1Q92597 394 aaKnown RBP19.39■□□□□ 0.69
HDAC6-205ENST00000423941 DNASE1L2Q92874 299 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 TICRRQ7Z2Z1 1910 aa19.39■□□□□ 0.69
HDAC6-205ENST00000423941 YJEFN3A6XGL0 299 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 E7ENQ6 273 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 GPR37L1O60883 481 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 RARGP13631 454 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 CHRNB2P17787 502 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 ATP5C1P36542 298 aaKnown RBP19.38■□□□□ 0.69
HDAC6-205ENST00000423941 MLLT6P55198 1093 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-205ENST00000423941 YWHAGP61981 247 aaKnown RBP eCLIP19.38■□□□□ 0.69
HDAC6-205ENST00000423941 PFKPQ01813 784 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 PDCLQ13371 301 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 SCUBE3Q8IX30 993 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 RNF214Q8ND24 703 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 SH3RF2Q8TEC5 729 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 IRF7Q92985 503 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 CPXM1Q96SM3 734 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 SYT11Q9BT88 431 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 KLF16Q9BXK1 252 aaPredicted RBP19.38■□□□□ 0.69
HDAC6-205ENST00000423941 XPO4Q9C0E2 1151 aaKnown RBP19.38■□□□□ 0.69
HDAC6-205ENST00000423941 AIPL1Q9NZN9 384 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 NAGPAQ9UK23 515 aa19.38■□□□□ 0.69
HDAC6-205ENST00000423941 KRBA1A5PL33 1030 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 SHISA7A6NL88 538 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 LEFTY2O00292 366 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 ZNF263O14978 683 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 PAPSS1O43252 624 aaPredicted RBP19.37■□□□□ 0.69
HDAC6-205ENST00000423941 TBX18O95935 607 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 MMEP08473 750 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 LCP1P13796 627 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 GDI1P31150 447 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 GABRB2P47870 512 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 PLCB2Q00722 1185 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 CDR2Q01850 454 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 IER5LQ5T953 404 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 BSPRYQ5W0U4 402 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 BEND5Q7L4P6 421 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 CACNA2D4Q7Z3S7 1137 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 GAS2L3Q86XJ1 694 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 SIX6OS1Q8N1H7 587 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 CDK5RAP1Q96SZ6 601 aaKnown RBP19.37■□□□□ 0.69
HDAC6-205ENST00000423941 NUP58Q9BVL2 599 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 BRD9Q9H8M2 597 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 THG1LQ9NWX6 298 aaKnown RBP19.37■□□□□ 0.69
HDAC6-205ENST00000423941 CPQQ9Y646 472 aa19.37■□□□□ 0.69
HDAC6-205ENST00000423941 ITIH6Q6UXX5 1313 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 A0A1W2PQJ5 194 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 E5RJQ4 531 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 GREM1O60565 184 aa19.36■□□□□ 0.69
HDAC6-205ENST00000423941 LSM8O95777 96 aaKnown RBP19.36■□□□□ 0.69
HDAC6-205ENST00000423941 CYP1A1P04798 512 aaPredicted RBP19.36■□□□□ 0.69
HDAC6-205ENST00000423941 FYNP06241 537 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms